Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AL590004.3-202ENST00000445883 451 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 ATP5G1P3-201ENST00000463301 410 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 LSM3P4-201ENST00000502948 309 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 OR4D12P-201ENST00000509361 911 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 IGHV3-57-201ENST00000520143 280 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC068339.2-201ENST00000534395 618 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 NPM1P5-201ENST00000557228 838 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC133794.1-201ENST00000602731 914 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC005776.1-201ENST00000603164 290 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC104763.3-201ENST00000613765 618 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AL163051.2-201ENST00000618976 735 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AP006248.3-201ENST00000623580 594 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 LPAL2-203ENST00000454031 2498 ntBASIC7.24□□□□□ -1.25
VTA1Q9NP79 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.24□□□□□ -1.25
VTA1Q9NP79 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
VTA1Q9NP79 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 OR10AB1P-202ENST00000641219 1686 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 ST13P16-201ENST00000401760 781 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 MTCYBP32-201ENST00000427945 1084 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 RPL6P30-201ENST00000443382 862 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC006326.1-201ENST00000445465 787 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 STRADBP1-201ENST00000478954 1281 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 HMGB1P47-201ENST00000511281 589 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 SNORA76.2-201ENST00000517095 137 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 RN7SKP35-201ENST00000517210 151 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 CYCSP38-201ENST00000559840 322 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC106785.3-201ENST00000564064 847 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 MRPS21P8-201ENST00000569196 235 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AP005136.2-201ENST00000583253 1049 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC067773.1-201ENST00000603284 1094 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 HMGB1P51-201ENST00000605166 638 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AL450270.1-201ENST00000606160 391 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC026979.4-201ENST00000606555 645 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AP002345.2-201ENST00000609961 904 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC008147.4-201ENST00000617570 1204 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 AC012653.2-201ENST00000621880 420 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 AL021877.2-201ENST00000624442 10684 ntBASIC7.23□□□□□ -1.25
VTA1Q9NP79 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.23□□□□□ -1.25
VTA1Q9NP79 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
VTA1Q9NP79 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.22□□□□□ -1.25
VTA1Q9NP79 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
VTA1Q9NP79 AC027575.3-201ENST00000583058 2747 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms