Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 AC018692.2-201ENST00000624130 348 ntBASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 PSMC1P6-201ENST00000477233 1319 ntBASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 AC027279.1-201ENST00000568885 4284 ntBASIC6.42□□□□□ -1.38
TRIM54Q9BYV2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 CCDC150P1-201ENST00000537123 2215 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC137056.2-201ENST00000624055 1958 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 RNU6-792P-201ENST00000363490 107 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MIR431-201ENST00000385266 114 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MEAF6P1-201ENST00000416092 327 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 PTPN2P1-201ENST00000423212 1072 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL589794.1-201ENST00000424971 390 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC007563.3-201ENST00000433233 371 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 GAPDHP75-201ENST00000433910 943 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL355355.1-201ENST00000442900 793 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL121578.2-201ENST00000448797 447 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 VN1R38P-201ENST00000450265 887 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC092824.1-201ENST00000483524 576 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 RN7SL350P-201ENST00000492591 299 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 UBTFL9-201ENST00000534504 1148 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC090912.3-201ENST00000609775 533 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC008147.4-201ENST00000617570 1204 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 U1.41-201ENST00000617626 165 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 MAPK10-350ENST00000641777 965 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AL355377.1-201ENST00000621125 1653 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 NEK2P2-201ENST00000438441 1338 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC093909.5-201ENST00000621839 1799 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 AC120036.2-201ENST00000509729 1474 ntBASIC6.41□□□□□ -1.38
TRIM54Q9BYV2 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 CCAT2-201ENST00000630920 1752 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 OR11H13P-201ENST00000359695 979 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AC245036.1-201ENST00000391727 309 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL590635.1-201ENST00000406314 586 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 MTATP6P31-201ENST00000406985 692 ntBASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM54Q9BYV2 GLUD1P9-201ENST00000420997 1173 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms