Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.45□□□□□ -1.22
SHKBP1Q8TBC3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 SPATA31C2-201ENST00000324915 3777 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC092634.1-201ENST00000366505 199 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 Y_RNA.517-201ENST00000384551 106 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 RNU6-1055P-201ENST00000391085 107 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 LARP1P1-201ENST00000407692 292 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 RPS3AP37-201ENST00000419176 745 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 GAPDHP51-201ENST00000426454 1000 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 Z74696.2-201ENST00000436514 498 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC064862.5-201ENST00000440618 334 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 WDR82P2-201ENST00000444540 928 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 RPL31P11-202ENST00000454082 372 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 OR13C1P-201ENST00000457612 963 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 SNORA81.1-201ENST00000458922 177 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC005165.2-201ENST00000466070 380 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC090543.1-201ENST00000492168 485 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 OR5H3P-201ENST00000502817 919 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC093281.2-201ENST00000510153 597 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 RN7SKP11-201ENST00000517018 287 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 SLC25A36P1-201ENST00000590111 465 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL606834.2-201ENST00000602954 668 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC023513.1-201ENST00000604396 691 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC073114.1-201ENST00000612027 490 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 MIR6885-201ENST00000612241 66 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 MIR6889-201ENST00000613185 59 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 MIR6849-201ENST00000618543 69 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC104985.2-201ENST00000620598 500 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC010608.2-201ENST00000624830 470 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AC140479.4-205ENST00000636339 820 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 AL136981.1-203ENST00000451452 3844 ntBASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.44□□□□□ -1.22
SHKBP1Q8TBC3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 AL589993.1-201ENST00000407450 2524 ntBASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.43□□□□□ -1.22
SHKBP1Q8TBC3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms