Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 SAMMSON-203ENST00000641005 2168 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 FAM3C2-201ENST00000312214 681 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 RN7SKP211-201ENST00000363328 315 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 RPL7P27-201ENST00000403775 720 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 EEF1GP7-201ENST00000422983 703 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 GAPDHP55-201ENST00000423136 803 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 B3GNT2P1-201ENST00000434960 952 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL020997.1-201ENST00000446554 349 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL109741.2-201ENST00000455561 343 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 TPT1P7-201ENST00000458300 517 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC107015.1-201ENST00000466902 747 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 RPL34P22-201ENST00000468193 318 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC040975.1-201ENST00000472104 316 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 RPL30P6-201ENST00000475925 342 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 PDCL3P4-201ENST00000489621 720 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC096751.1-202ENST00000502691 1067 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC025881.1-201ENST00000518851 512 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AP001804.1-201ENST00000526868 919 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 MED28P5-201ENST00000528254 438 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 OR5AL2P-201ENST00000532185 920 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC037479.1-201ENST00000558361 625 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC044792.1-201ENST00000593294 196 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL031429.2-201ENST00000602605 649 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL583832.1-201ENST00000603227 784 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC008385.1-201ENST00000604421 355 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC097381.3-201ENST00000608962 462 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC004223.4-201ENST00000612426 332 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL357140.4-201ENST00000636827 412 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 DDX10P2-201ENST00000417796 2614 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC090229.1-201ENST00000590983 1609 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AL133243.2-201ENST00000610331 1621 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AC006116.1-201ENST00000587908 2171 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.68□□□□□ -1.34
ATG4DQ86TL0 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 AP002364.1-201ENST00000623330 3386 ntBASIC6.68□□□□□ -1.34
ATG4DQ86TL0 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 WASF5P-205ENST00000428639 1455 ntBASIC6.67□□□□□ -1.34
ATG4DQ86TL0 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ATG4DQ86TL0 RNA5SP218-201ENST00000363188 109 ntBASIC6.67□□□□□ -1.34
ATG4DQ86TL0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms