Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.54□□□□□ -1.2
RNF43Q68DV7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RNF43Q68DV7 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 CASC19-243ENST00000641588 1546 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC006116.1-201ENST00000587908 2171 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 LPAL2-203ENST00000454031 2498 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 RPS3AP5-201ENST00000389400 821 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 CNN3P1-201ENST00000401596 935 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL139415.2-201ENST00000431968 163 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 MTND3P10-201ENST00000450967 341 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 OSTCP1-201ENST00000455507 450 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC090543.1-201ENST00000492168 485 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 SNRPCP11-201ENST00000492453 205 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 TECRP2-201ENST00000503270 928 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC010374.1-201ENST00000503762 1237 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC093281.2-201ENST00000510153 597 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC147055.3-201ENST00000510547 851 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC138938.1-201ENST00000515431 782 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SUMO2P19-201ENST00000518920 295 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC244502.2-201ENST00000543361 851 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ACTR3BP3-201ENST00000565577 979 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 RSL24D1P11-201ENST00000591045 491 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL445222.1-201ENST00000607259 628 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 RNU4-89P-201ENST00000607443 133 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 AC073114.1-201ENST00000612027 490 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 MTND5P24-201ENST00000438892 1767 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.53□□□□□ -1.2
RNF43Q68DV7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF43Q68DV7 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.52□□□□□ -1.2
RNF43Q68DV7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RNF43Q68DV7 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.52□□□□□ -1.2
RNF43Q68DV7 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF43Q68DV7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF43Q68DV7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF43Q68DV7 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RNF43Q68DV7 PPIAP22-201ENST00000358455 498 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms