Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.09□□□□□ -1.76
PRKDCP78527 RPL36AP15-201ENST00000444514 266 ntBASIC4.09□□□□□ -1.76
PRKDCP78527 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.09□□□□□ -1.76
PRKDCP78527 AC078878.1-201ENST00000539832 958 ntBASIC4.09□□□□□ -1.76
PRKDCP78527 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
PRKDCP78527 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.09□□□□□ -1.76
PRKDCP78527 PCNPP1-201ENST00000552501 511 ntBASIC4.09□□□□□ -1.76
PRKDCP78527 AC053481.3-201ENST00000577881 843 ntBASIC4.09□□□□□ -1.76
PRKDCP78527 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.09□□□□□ -1.76
PRKDCP78527 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRKDCP78527 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 MIR208A-201ENST00000362287 71 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 SNORA57.1-201ENST00000391227 145 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 RPL38P3-201ENST00000484463 213 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 AC024940.3-201ENST00000538551 316 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC005084.1-201ENST00000605160 304 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AL139099.4-201ENST00000614802 114 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC011379.1-201ENST00000508713 3025 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC023824.7-201ENST00000623041 5731 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRKDCP78527 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC096921.2-201ENST00000561507 1916 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRKDCP78527 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 FRG2FP-204ENST00000453982 852 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.08□□□□□ -1.76
PRKDCP78527 RPL23AP72-201ENST00000492447 435 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 SSX8-201ENST00000506270 579 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC021006.3-201ENST00000530771 192 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 GCSHP4-201ENST00000538792 439 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 CCDC58P3-201ENST00000590792 430 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC112694.2-201ENST00000623697 768 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 ASNSP1-204ENST00000641977 1664 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 AC008957.3-201ENST00000624112 2242 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKDCP78527 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 OR7E158P-201ENST00000524483 910 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AP001781.1-201ENST00000530977 207 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC009117.1-201ENST00000563948 554 ntBASIC4.08□□□□□ -1.76
PRKDCP78527 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.08□□□□□ -1.76
PRKDCP78527 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PRKDCP78527 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.08□□□□□ -1.76
PRKDCP78527 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRKDCP78527 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 MAPK10-323ENST00000641493 3207 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 AL078599.1-201ENST00000402075 293 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 RPL17P36-201ENST00000420302 549 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKDCP78527 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKDCP78527 MTND6P2-201ENST00000512226 524 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AC126615.2-201ENST00000553003 515 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 HIRAP1-201ENST00000605318 787 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AC091932.2-201ENST00000623014 291 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRKDCP78527 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms