Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN2P57739 RNA5SP156-201ENST00000410250 110 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 HMGN1P20-201ENST00000411849 300 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 MTND4LP21-201ENST00000415303 295 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLDN2P57739 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 COL6A4P2-205ENST00000509855 506 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC090958.1-201ENST00000511122 351 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN2P57739 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC068305.2-201ENST00000550567 1205 ntBASIC6.15□□□□□ -1.42
CLDN2P57739 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.15□□□□□ -1.42
CLDN2P57739 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.15□□□□□ -1.42
CLDN2P57739 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN2P57739 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.15□□□□□ -1.42
CLDN2P57739 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN2P57739 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLDN2P57739 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CLDN2P57739 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN2P57739 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN2P57739 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLDN2P57739 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.43
CLDN2P57739 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.15□□□□□ -1.43
CLDN2P57739 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 MT-RNR1-201ENST00000389680 954 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN2P57739 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 MAPRE1P3-201ENST00000435438 796 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.14□□□□□ -1.43
CLDN2P57739 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN2P57739 AC084754.1-201ENST00000463466 464 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 AL049829.1-201ENST00000465411 156 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 TRBV8-1-201ENST00000481590 279 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN2P57739 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.14□□□□□ -1.43
CLDN2P57739 PRMT5P1-201ENST00000514351 598 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN2P57739 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN2P57739 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN2P57739 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN2P57739 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 AP002345.2-201ENST00000609961 904 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 PCA3_2.1-201ENST00000612507 409 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 AC073575.2-201ENST00000614212 627 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 MIR6729-201ENST00000618194 65 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 AC026124.2-201ENST00000621847 656 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 AC073488.3-201ENST00000631611 778 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 AC092724.1-201ENST00000624623 3397 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN2P57739 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 CASC19-238ENST00000641523 1558 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN2P57739 AP002370.1-201ENST00000528055 1602 ntBASIC6.14□□□□□ -1.43
CLDN2P57739 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN2P57739 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.13□□□□□ -1.43
CLDN2P57739 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CLDN2P57739 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLDN2P57739 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 MAPK10-287ENST00000641217 3037 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN2P57739 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN2P57739 AC022325.1-201ENST00000502748 2199 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN2P57739 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 AC107980.1-201ENST00000558671 3355 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN2P57739 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN2P57739 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN2P57739 TMSB4XP2-201ENST00000335179 210 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 RNA5SP477-201ENST00000362639 119 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 RNA5SP510-201ENST00000364697 99 ntBASIC6.13□□□□□ -1.43
CLDN2P57739 RN7SKP78-201ENST00000364711 318 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms