Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 AL449283.1-201ENST00000602631 3403 ntBASIC5.74□□□□□ -1.49
LIM2P55344 SNORA51.9-201ENST00000384295 124 ntBASIC5.74□□□□□ -1.49
LIM2P55344 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LIM2P55344 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 RNA5SP431-201ENST00000410312 120 ntBASIC5.74□□□□□ -1.49
LIM2P55344 PTCD2P2-201ENST00000415579 1095 ntBASIC5.74□□□□□ -1.49
LIM2P55344 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 AC245884.2-201ENST00000426257 404 ntBASIC5.74□□□□□ -1.49
LIM2P55344 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 PNKDP1-201ENST00000435914 430 ntBASIC5.74□□□□□ -1.49
LIM2P55344 RPSAP40-201ENST00000442343 891 ntBASIC5.74□□□□□ -1.49
LIM2P55344 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 CTSLP6-201ENST00000458273 1002 ntBASIC5.74□□□□□ -1.49
LIM2P55344 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 RN7SL741P-201ENST00000482473 289 ntBASIC5.74□□□□□ -1.49
LIM2P55344 RPL12P7-201ENST00000493832 494 ntBASIC5.74□□□□□ -1.49
LIM2P55344 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 OR7A8P-201ENST00000595427 913 ntBASIC5.74□□□□□ -1.49
LIM2P55344 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
LIM2P55344 AC068768.2-201ENST00000602352 343 ntBASIC5.74□□□□□ -1.49
LIM2P55344 AC004890.3-201ENST00000605566 1095 ntBASIC5.74□□□□□ -1.49
LIM2P55344 AC091167.5-201ENST00000605689 894 ntBASIC5.74□□□□□ -1.49
LIM2P55344 AC073592.6-201ENST00000624271 415 ntBASIC5.74□□□□□ -1.49
LIM2P55344 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 AC104966.1-201ENST00000467010 1464 ntBASIC5.74□□□□□ -1.49
LIM2P55344 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 AC016583.1-201ENST00000624221 2431 ntBASIC5.74□□□□□ -1.49
LIM2P55344 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 MTCO1P28-201ENST00000574177 1528 ntBASIC5.74□□□□□ -1.49
LIM2P55344 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.74□□□□□ -1.49
LIM2P55344 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.73□□□□□ -1.49
LIM2P55344 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.73□□□□□ -1.49
LIM2P55344 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIM2P55344 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIM2P55344 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.73□□□□□ -1.49
LIM2P55344 AL731532.1-201ENST00000623972 4236 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AL354854.1-201ENST00000455940 1363 ntBASIC5.73□□□□□ -1.49
LIM2P55344 RN7SKP187-201ENST00000365536 330 ntBASIC5.73□□□□□ -1.49
LIM2P55344 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 AC245096.1-201ENST00000413104 546 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.73□□□□□ -1.49
LIM2P55344 RPL6P30-201ENST00000443382 862 ntBASIC5.73□□□□□ -1.49
LIM2P55344 TRIM60P16-201ENST00000444048 694 ntBASIC5.73□□□□□ -1.49
LIM2P55344 RBMY2AP-201ENST00000445405 1157 ntBASIC5.73□□□□□ -1.49
LIM2P55344 RBMY2CP-201ENST00000448575 1157 ntBASIC5.73□□□□□ -1.49
LIM2P55344 RBMY2DP-202ENST00000448881 1157 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AC016027.4-201ENST00000450866 277 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AC009963.3-201ENST00000458090 486 ntBASIC5.73□□□□□ -1.49
LIM2P55344 RN7SL168P-201ENST00000463821 279 ntBASIC5.73□□□□□ -1.49
LIM2P55344 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.73□□□□□ -1.49
LIM2P55344 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIM2P55344 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.73□□□□□ -1.49
LIM2P55344 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 AL158068.1-201ENST00000506116 616 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.73□□□□□ -1.49
LIM2P55344 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 AC087360.1-201ENST00000518788 616 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AC011853.1-201ENST00000518911 454 ntBASIC5.73□□□□□ -1.49
LIM2P55344 IGKV3D-25-201ENST00000519599 235 ntBASIC5.73□□□□□ -1.49
LIM2P55344 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LIM2P55344 OR56A7P-201ENST00000524865 941 ntBASIC5.73□□□□□ -1.49
LIM2P55344 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.73□□□□□ -1.49
LIM2P55344 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.73□□□□□ -1.49
LIM2P55344 AC006512.2-201ENST00000543250 486 ntBASIC5.73□□□□□ -1.49
LIM2P55344 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
LIM2P55344 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AC004801.6-201ENST00000616571 978 ntBASIC5.73□□□□□ -1.49
LIM2P55344 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.73□□□□□ -1.49
LIM2P55344 AC021422.1-201ENST00000621212 473 ntBASIC5.73□□□□□ -1.49
LIM2P55344 AL357562.1-201ENST00000624911 609 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms