Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AP002884.5-201ENST00000595053 1132 ntBASIC6.72□□□□□ -1.33
NEK3P51956 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 PPATP2-201ENST00000605635 508 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 AC068726.1-201ENST00000610993 341 ntBASIC6.72□□□□□ -1.33
NEK3P51956 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC025016.1-201ENST00000616746 682 ntBASIC6.72□□□□□ -1.33
NEK3P51956 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC021766.1-201ENST00000624404 741 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC018659.2-201ENST00000624690 715 ntBASIC6.72□□□□□ -1.33
NEK3P51956 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.72□□□□□ -1.33
NEK3P51956 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NEK3P51956 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NEK3P51956 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NEK3P51956 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEK3P51956 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NEK3P51956 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.71□□□□□ -1.33
NEK3P51956 AC005332.9-201ENST00000620266 2921 ntBASIC6.71□□□□□ -1.33
NEK3P51956 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEK3P51956 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NEK3P51956 ZNF402P-201ENST00000404435 3100 ntBASIC6.71□□□□□ -1.34
NEK3P51956 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 OR7A2P-201ENST00000304105 930 ntBASIC6.71□□□□□ -1.34
NEK3P51956 PPIAP24-201ENST00000328558 471 ntBASIC6.71□□□□□ -1.34
NEK3P51956 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 RNA5SP85-201ENST00000365378 119 ntBASIC6.71□□□□□ -1.34
NEK3P51956 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 RN7SKP296-201ENST00000411185 341 ntBASIC6.71□□□□□ -1.34
NEK3P51956 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 RPS26P13-201ENST00000419030 330 ntBASIC6.71□□□□□ -1.34
NEK3P51956 MTCYBP7-201ENST00000419540 1134 ntBASIC6.71□□□□□ -1.34
NEK3P51956 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 BMP6P1-201ENST00000431230 679 ntBASIC6.71□□□□□ -1.34
NEK3P51956 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 AC021087.2-201ENST00000504656 1203 ntBASIC6.71□□□□□ -1.34
NEK3P51956 OR52K3P-201ENST00000531655 943 ntBASIC6.71□□□□□ -1.34
NEK3P51956 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.71□□□□□ -1.34
NEK3P51956 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.71□□□□□ -1.34
NEK3P51956 AC037479.1-201ENST00000558361 625 ntBASIC6.71□□□□□ -1.34
NEK3P51956 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.71□□□□□ -1.34
NEK3P51956 AC092718.4-201ENST00000566639 716 ntBASIC6.71□□□□□ -1.34
NEK3P51956 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 FAM106CP-201ENST00000582212 507 ntBASIC6.71□□□□□ -1.34
NEK3P51956 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.71□□□□□ -1.34
NEK3P51956 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 AC006249.1-201ENST00000621223 471 ntBASIC6.71□□□□□ -1.34
NEK3P51956 MIR6823-201ENST00000622118 61 ntBASIC6.71□□□□□ -1.34
NEK3P51956 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.71□□□□□ -1.34
NEK3P51956 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
NEK3P51956 PSMC1P6-201ENST00000477233 1319 ntBASIC6.71□□□□□ -1.34
NEK3P51956 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 AC007159.1-201ENST00000566529 4706 ntBASIC6.71□□□□□ -1.34
NEK3P51956 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NEK3P51956 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 DOCK11P1-201ENST00000553480 5932 ntBASIC6.7□□□□□ -1.34
NEK3P51956 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
NEK3P51956 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NEK3P51956 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NEK3P51956 AP003170.5-201ENST00000397185 335 ntBASIC6.7□□□□□ -1.34
NEK3P51956 VIM2P-201ENST00000402383 1294 ntBASIC6.7□□□□□ -1.34
NEK3P51956 Z86062.1-201ENST00000406773 777 ntBASIC6.7□□□□□ -1.34
NEK3P51956 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
NEK3P51956 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
NEK3P51956 RANP6-201ENST00000413691 644 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 AL139415.1-201ENST00000424862 352 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AL645939.3-201ENST00000435408 225 ntBASIC6.7□□□□□ -1.34
NEK3P51956 MTCYBP29-201ENST00000436327 1006 ntBASIC6.7□□□□□ -1.34
NEK3P51956 H3F3BP1-201ENST00000440551 403 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AL513321.1-201ENST00000441175 761 ntBASIC6.7□□□□□ -1.34
NEK3P51956 COL11A2P1-205ENST00000441798 676 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms