Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA4P51532 SLC35E1P1-201ENST00000419313 864 ntBASIC10.43□□□□□ -0.74
SMARCA4P51532 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC10.43□□□□□ -0.74
SMARCA4P51532 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC10.43□□□□□ -0.74
SMARCA4P51532 RPL7P61-201ENST00000451721 751 ntBASIC10.43□□□□□ -0.74
SMARCA4P51532 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC10.43□□□□□ -0.74
SMARCA4P51532 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SMARCA4P51532 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SMARCA4P51532 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC10.43□□□□□ -0.74
SMARCA4P51532 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SMARCA4P51532 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC10.42□□□□□ -0.74
SMARCA4P51532 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 RPL15P21-201ENST00000495592 567 ntBASIC10.42□□□□□ -0.74
SMARCA4P51532 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC10.42□□□□□ -0.74
SMARCA4P51532 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC10.42□□□□□ -0.74
SMARCA4P51532 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC10.42□□□□□ -0.74
SMARCA4P51532 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC10.42□□□□□ -0.74
SMARCA4P51532 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC10.42□□□□□ -0.74
SMARCA4P51532 MIR6820-201ENST00000611508 62 ntBASIC10.42□□□□□ -0.74
SMARCA4P51532 AC090510.2-201ENST00000617465 629 ntBASIC10.42□□□□□ -0.74
SMARCA4P51532 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC10.42□□□□□ -0.74
SMARCA4P51532 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SMARCA4P51532 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SMARCA4P51532 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC10.41□□□□□ -0.74
SMARCA4P51532 RN7SKP28-201ENST00000364770 305 ntBASIC10.41□□□□□ -0.74
SMARCA4P51532 RN7SKP213-201ENST00000410746 298 ntBASIC10.41□□□□□ -0.74
SMARCA4P51532 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC10.41□□□□□ -0.74
SMARCA4P51532 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC10.41□□□□□ -0.74
SMARCA4P51532 AL590762.4-201ENST00000425885 253 ntBASIC10.41□□□□□ -0.74
SMARCA4P51532 AP000547.1-201ENST00000454360 617 ntBASIC10.41□□□□□ -0.74
SMARCA4P51532 LDHBP2-201ENST00000456969 1005 ntBASIC10.41□□□□□ -0.74
SMARCA4P51532 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC10.41□□□□□ -0.74
SMARCA4P51532 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10.41□□□□□ -0.74
SMARCA4P51532 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.41□□□□□ -0.74
SMARCA4P51532 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SMARCA4P51532 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SMARCA4P51532 RNU1-77P-201ENST00000390868 162 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA4P51532 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SMARCA4P51532 ELOCP3-201ENST00000439303 348 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC10.4□□□□□ -0.74
SMARCA4P51532 AC072052.1-201ENST00000496556 306 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SMARCA4P51532 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC10.4□□□□□ -0.74
SMARCA4P51532 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC10.4□□□□□ -0.74
SMARCA4P51532 OR11J2P-201ENST00000555298 907 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC10.4□□□□□ -0.74
SMARCA4P51532 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC10.4□□□□□ -0.74
SMARCA4P51532 AC027334.1-201ENST00000603257 310 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 AC000068.2-201ENST00000608816 460 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SMARCA4P51532 AC018809.2-201ENST00000602436 3823 ntBASIC10.4□□□□□ -0.74
SMARCA4P51532 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SMARCA4P51532 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SMARCA4P51532 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC10.4□□□□□ -0.75
SMARCA4P51532 SSX3-202ENST00000376893 800 ntTSL 2 BASIC10.4□□□□□ -0.75
SMARCA4P51532 AL390774.1-201ENST00000411924 246 ntBASIC10.4□□□□□ -0.75
SMARCA4P51532 AC019205.1-201ENST00000421830 730 ntBASIC10.4□□□□□ -0.75
SMARCA4P51532 AL451136.1-201ENST00000435399 325 ntBASIC10.4□□□□□ -0.75
SMARCA4P51532 OR6D1P-201ENST00000436165 939 ntBASIC10.4□□□□□ -0.75
SMARCA4P51532 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC10.4□□□□□ -0.75
SMARCA4P51532 RN7SL570P-201ENST00000484405 292 ntBASIC10.4□□□□□ -0.75
SMARCA4P51532 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC10.4□□□□□ -0.75
SMARCA4P51532 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC10.4□□□□□ -0.75
SMARCA4P51532 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC10.4□□□□□ -0.75
SMARCA4P51532 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC10.4□□□□□ -0.75
SMARCA4P51532 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC10.4□□□□□ -0.75
SMARCA4P51532 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SMARCA4P51532 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC10.4□□□□□ -0.75
SMARCA4P51532 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA4P51532 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC10.39□□□□□ -0.75
SMARCA4P51532 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA4P51532 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC10.39□□□□□ -0.75
SMARCA4P51532 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA4P51532 TNPO1P2-201ENST00000426249 2665 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SMARCA4P51532 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SMARCA4P51532 MIR133B-201ENST00000362210 119 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA4P51532 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA4P51532 RPL7L1P9-201ENST00000431298 745 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 AL450996.1-201ENST00000445574 1202 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 AL162739.1-201ENST00000450606 307 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC10.39□□□□□ -0.75
SMARCA4P51532 AC090638.1-201ENST00000498296 909 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms