Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH3P22223 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH3P22223 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CDH3P22223 MIR621-201ENST00000384919 96 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AL360271.1-201ENST00000395679 510 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AL050335.1-201ENST00000396909 869 ntBASIC6.15□□□□□ -1.42
CDH3P22223 YWHAZP6-201ENST00000399764 738 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AC116036.1-201ENST00000412199 367 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 CYCSP52-201ENST00000422857 310 ntBASIC6.15□□□□□ -1.42
CDH3P22223 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
CDH3P22223 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC108479.1-201ENST00000431142 427 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH3P22223 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH3P22223 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH3P22223 RN7SL714P-201ENST00000487050 298 ntBASIC6.15□□□□□ -1.42
CDH3P22223 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC018797.1-201ENST00000510791 255 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AC106800.3-201ENST00000511389 308 ntBASIC6.15□□□□□ -1.42
CDH3P22223 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC011853.1-201ENST00000518911 454 ntBASIC6.15□□□□□ -1.42
CDH3P22223 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.15□□□□□ -1.42
CDH3P22223 AP005901.4-201ENST00000577336 569 ntBASIC6.15□□□□□ -1.42
CDH3P22223 MIR4271-201ENST00000582451 67 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.15□□□□□ -1.42
CDH3P22223 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH3P22223 SMIM12P1-201ENST00000603004 274 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AC097467.4-201ENST00000605504 141 ntBASIC6.15□□□□□ -1.42
CDH3P22223 RPSAP75-201ENST00000605848 301 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.15□□□□□ -1.42
CDH3P22223 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.15□□□□□ -1.42
CDH3P22223 TCL6_3.1-201ENST00000619064 137 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AL109924.4-201ENST00000623089 670 ntBASIC6.15□□□□□ -1.42
CDH3P22223 AP001052.1-201ENST00000626421 99 ntBASIC6.15□□□□□ -1.42
CDH3P22223 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH3P22223 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CDH3P22223 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CDH3P22223 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.15□□□□□ -1.43
CDH3P22223 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 AC005332.9-201ENST00000620266 2921 ntBASIC6.15□□□□□ -1.43
CDH3P22223 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
CDH3P22223 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CDH3P22223 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
CDH3P22223 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
CDH3P22223 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CDH3P22223 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH3P22223 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH3P22223 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CDH3P22223 RNA5SP350-201ENST00000363298 111 ntBASIC6.14□□□□□ -1.43
CDH3P22223 CXADRP1-201ENST00000398098 1095 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.14□□□□□ -1.43
CDH3P22223 GAPDHP59-201ENST00000435908 267 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 AL136455.1-201ENST00000441083 1240 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AL645936.1-201ENST00000441979 518 ntBASIC6.14□□□□□ -1.43
CDH3P22223 CCNJP2-201ENST00000457810 1163 ntBASIC6.14□□□□□ -1.43
CDH3P22223 CTSLP6-201ENST00000458273 1002 ntBASIC6.14□□□□□ -1.43
CDH3P22223 RN7SL369P-201ENST00000477138 299 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AC117394.1-201ENST00000477323 567 ntBASIC6.14□□□□□ -1.43
CDH3P22223 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CDH3P22223 SNX18P25-201ENST00000510539 758 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH3P22223 IGKV1D-22-201ENST00000518953 324 ntBASIC6.14□□□□□ -1.43
CDH3P22223 COX6B1P4-201ENST00000519826 484 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH3P22223 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH3P22223 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.14□□□□□ -1.43
CDH3P22223 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH3P22223 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.14□□□□□ -1.43
CDH3P22223 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.14□□□□□ -1.43
CDH3P22223 CXADRP3-202ENST00000617265 1100 ntBASIC6.14□□□□□ -1.43
CDH3P22223 AC073593.1-201ENST00000624500 411 ntBASIC6.14□□□□□ -1.43
CDH3P22223 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms