Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 SLC20A1P2-201ENST00000618036 966 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC006840.1-201ENST00000623069 542 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 AL391262.1-201ENST00000556558 1992 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC093297.3-201ENST00000607056 2517 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PDGFAP04085 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 MTND4P31-201ENST00000425607 1343 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 AP002833.3-201ENST00000625075 2265 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 NF1P2-201ENST00000556855 2505 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC068044.1-201ENST00000441585 1978 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 HMGB1P5-201ENST00000255320 642 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 OR4G2P-201ENST00000328113 903 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 TMSB4XP2-201ENST00000335179 210 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 SNORA4.1-201ENST00000364263 144 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 MT-TP-201ENST00000387461 68 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 MIR1272-201ENST00000408106 129 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 MIR548F1-201ENST00000408667 84 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RN7SKP59-201ENST00000410520 314 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 MEAF6P1-201ENST00000416092 327 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 FDPSP6-201ENST00000425091 512 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 MTND4P28-201ENST00000426217 387 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 MTCO2P19-201ENST00000427513 598 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 HMGB1P45-201ENST00000435986 653 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RPSAP40-201ENST00000442343 891 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 AL512326.1-201ENST00000443050 721 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RPL5P10-201ENST00000445207 894 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC093166.3-201ENST00000448785 303 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.3□□□□□ -1.24
PDGFAP04085 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 RN7SL414P-201ENST00000469545 294 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RN7SL58P-201ENST00000473445 294 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.3□□□□□ -1.24
PDGFAP04085 MYL12BP2-201ENST00000503948 512 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC131392.1-201ENST00000506490 633 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC138866.2-201ENST00000508650 584 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 GUSBP9-201ENST00000510138 584 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 CYP4F27P-201ENST00000514557 494 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 SETP21-201ENST00000514799 892 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 RNA5SP287-201ENST00000516358 103 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 AP003033.2-201ENST00000528901 805 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.3□□□□□ -1.24
PDGFAP04085 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 SERPINE4P-201ENST00000554978 281 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 ZNF519P3-201ENST00000557158 1032 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AL132640.2-202ENST00000559732 614 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC092325.1-201ENST00000566449 554 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC090287.1-201ENST00000578374 291 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC7.3□□□□□ -1.24
PDGFAP04085 AC090415.1-201ENST00000581877 847 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC7.3□□□□□ -1.24
PDGFAP04085 EXOSC3P2-201ENST00000594464 497 ntBASIC7.3□□□□□ -1.24
PDGFAP04085 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDGFAP04085 AC106028.5-201ENST00000610332 395 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms