Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC245096.1-201ENST00000413104 546 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC066692.1-201ENST00000421721 457 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 FTLP8-201ENST00000446770 267 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 CFL1P4-201ENST00000451536 498 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AL359839.1-201ENST00000451975 1160 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC060775.1-201ENST00000518241 520 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AP003396.4-201ENST00000527574 265 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 TRIM51DP-201ENST00000529746 596 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 NANOGNBP2-201ENST00000544753 553 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 RPA2P1-201ENST00000556557 721 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AL034374.2-201ENST00000605281 548 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AL096712.1-201ENST00000614561 159 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC245014.3-201ENST00000618589 347 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 TCL6_3.1-201ENST00000619064 137 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AL137067.2-201ENST00000621202 131 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AP001962.1-201ENST00000624114 559 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 AC022726.2-201ENST00000634673 547 ntBASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLCF1Q9UBD9 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 RPS2P45-201ENST00000469997 2057 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AL391261.1-201ENST00000555712 1479 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 RNU6-673P-201ENST00000365084 104 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 SUGT1P2-201ENST00000379452 992 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TRIM60P16-201ENST00000444048 694 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AL358876.1-201ENST00000453364 1075 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 CST12P-201ENST00000457644 362 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AP005639.1-201ENST00000526939 192 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC090236.2-201ENST00000587933 1101 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 NPIPB1P-202ENST00000588786 828 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 FO681491.1-202ENST00000623392 737 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AC129778.1-202ENST00000623812 261 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AL591379.1-207ENST00000635982 261 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 MTND5P12-201ENST00000502851 1449 ntBASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLCF1Q9UBD9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 AP001541.1-201ENST00000623322 1904 ntBASIC5.46□□□□□ -1.53
CLCF1Q9UBD9 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 681.5 ms