Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL3P13-201ENST00000550415 216 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SYPL1P2-201ENST00000582878 727 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 NPIPB1P-202ENST00000588786 828 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC027334.1-201ENST00000603257 310 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC016597.2-201ENST00000613256 341 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 GAPDHP41-201ENST00000613707 975 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC116667.2-201ENST00000641075 823 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 AC119674.1-220ENST00000641502 1048 ntBASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.48□□□□□ -1.37
ATG4AQ8WYN0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AL449283.1-201ENST00000602631 3403 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AP000547.3-204ENST00000588548 2523 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RNU6-152P-201ENST00000384037 107 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 SNORA70.9-201ENST00000384370 135 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 MIR431-201ENST00000385266 114 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RSL24D1P1-201ENST00000404972 493 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RNA5SP155-201ENST00000411154 129 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 MEAF6P1-201ENST00000416092 327 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC073508.1-201ENST00000428866 656 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RANP2-201ENST00000456833 229 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC092902.1-201ENST00000486999 259 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 RNA5SP418-201ENST00000515951 117 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC138701.1-201ENST00000524329 714 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AP004607.5-201ENST00000532034 217 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 OR4A6P-201ENST00000534364 970 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC068408.1-201ENST00000577406 1144 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC245884.10-201ENST00000597355 337 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC120053.1-201ENST00000607706 736 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 ZNF101P1-201ENST00000435701 1720 ntBASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ATG4AQ8WYN0 OR52B5P-204ENST00000641744 3467 ntBASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 OR4G1P-202ENST00000641173 1788 ntBASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.46□□□□□ -1.37
ATG4AQ8WYN0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 RN7SKP151-201ENST00000410230 316 ntBASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 RN7SKP129-201ENST00000410288 299 ntBASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 RPS7P14-201ENST00000426405 583 ntBASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 AL354707.3-201ENST00000427308 331 ntBASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 GTF3AP6-201ENST00000432585 986 ntBASIC6.46□□□□□ -1.38
ATG4AQ8WYN0 BX679664.2-201ENST00000439282 283 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms