Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC130360.2-201ENST00000533477 1556 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 AC092266.1-201ENST00000610958 165 ntBASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.26□□□□□ -1.41
SHROOM3Q8TF72 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 EIF3EP1-201ENST00000433978 1316 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 SNORA74A-201ENST00000364089 198 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RNA5SP242-201ENST00000364171 118 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AL157702.1-201ENST00000398764 426 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RPL21P50-201ENST00000417698 477 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 HLA-DPA3-207ENST00000454398 229 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RN7SL799P-201ENST00000475891 298 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RPS23P1-201ENST00000491662 432 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC090826.1-203ENST00000569235 490 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC008507.3-201ENST00000585753 472 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 FAM72A-208ENST00000607379 1139 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC096861.1-201ENST00000616652 240 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC119674.1-217ENST00000641942 1086 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC084782.1-201ENST00000564401 2465 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AC005225.5-201ENST00000623547 2225 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 DOCK11P1-201ENST00000553480 5932 ntBASIC6.25□□□□□ -1.41
SHROOM3Q8TF72 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 RNA5SP273-201ENST00000362484 113 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 SUGT1P2-201ENST00000379452 992 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 TUBB4BP6-201ENST00000437576 479 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC005077.1-201ENST00000449226 375 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 IGKV2-19-201ENST00000518132 283 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC021269.1-201ENST00000526860 705 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC091305.2-201ENST00000624049 1576 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 RNU105B-201ENST00000364478 208 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 RNA5SP500-201ENST00000364486 119 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC016027.4-201ENST00000450866 277 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 PPIAP19-201ENST00000486414 492 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 RPL12P30-201ENST00000488389 499 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 CYP4F27P-201ENST00000514557 494 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 AC004890.3-201ENST00000605566 1095 ntBASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.24□□□□□ -1.41
SHROOM3Q8TF72 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SHROOM3Q8TF72 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms