Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RP1L1Q8IWN7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.57□□□□□ -1.52
RP1L1Q8IWN7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC5.57□□□□□ -1.52
RP1L1Q8IWN7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RP1L1Q8IWN7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 NPM1P4-201ENST00000414095 812 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 NPM1P22-201ENST00000427761 952 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 SUMO2P7-201ENST00000511179 285 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 GAPDHP71-201ENST00000511530 1003 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 SCARNA18.1-201ENST00000516330 83 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 RNA5SP92-201ENST00000516437 110 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AL390726.5-202ENST00000564800 256 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 MIR1269B-201ENST00000580405 75 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 MIR7155-201ENST00000615925 56 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 TSHZ2-205ENST00000626626 670 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 RNU105B-201ENST00000364478 208 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 RNU1-46P-201ENST00000384425 164 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 RPL35AP3-201ENST00000414680 288 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 EEF1B2P6-201ENST00000445713 673 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC005077.1-201ENST00000449226 375 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 RN7SL610P-201ENST00000463845 291 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC095057.1-201ENST00000507583 168 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 CYCSP22-201ENST00000517555 339 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC110056.1-201ENST00000525759 911 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AL049840.6-201ENST00000604583 345 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 MIR7159-201ENST00000620587 66 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 MIR193BHG-214ENST00000641765 509 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 C4BPAP1-201ENST00000415474 1893 ntBASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RP1L1Q8IWN7 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 SNORA74A-201ENST00000364089 198 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 DUTP4-201ENST00000424782 475 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 CDK7P1-201ENST00000434574 693 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AL034399.1-201ENST00000451535 380 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC231760.1-201ENST00000498002 260 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC024940.4-201ENST00000605507 246 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ARHGAP42P4-201ENST00000549782 2934 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 UGT2B25P-201ENST00000511504 1586 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AC105114.1-201ENST00000624795 1862 ntBASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RP1L1Q8IWN7 SNORA64.1-201ENST00000362600 132 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms