Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
COL16A1Q07092 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 AC110716.2-201ENST00000563865 3945 ntBASIC7.93□□□□□ -1.14
COL16A1Q07092 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
COL16A1Q07092 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.93□□□□□ -1.14
COL16A1Q07092 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL16A1Q07092 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL16A1Q07092 GAPDHP42-201ENST00000406848 981 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.92□□□□□ -1.14
COL16A1Q07092 MORF4L1P5-201ENST00000433352 961 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 TPT1P13-201ENST00000449760 499 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 RPL23AP60-201ENST00000450011 454 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 SDC4P-201ENST00000453285 601 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AL389915.2-201ENST00000454576 441 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 RN7SL459P-201ENST00000481078 302 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.92□□□□□ -1.14
COL16A1Q07092 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC009163.6-201ENST00000612367 342 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.92□□□□□ -1.14
COL16A1Q07092 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
COL16A1Q07092 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC010132.2-201ENST00000295493 1043 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 RN7SKP28-201ENST00000364770 305 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC245028.1-201ENST00000423259 256 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 MGAT2P1-201ENST00000449718 797 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AC073594.1-201ENST00000462065 364 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.92□□□□□ -1.14
COL16A1Q07092 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.92□□□□□ -1.14
COL16A1Q07092 HSPE1P2-201ENST00000554777 306 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 AC234771.5-201ENST00000600161 514 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
COL16A1Q07092 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 AC005839.1-201ENST00000624148 3213 ntBASIC7.92□□□□□ -1.14
COL16A1Q07092 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL16A1Q07092 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
COL16A1Q07092 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
COL16A1Q07092 RNA5SP30-201ENST00000365552 115 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 RPS27AP3-201ENST00000453803 454 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 AC087672.1-201ENST00000479876 766 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AC073610.1-201ENST00000489971 396 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AC020937.1-201ENST00000519677 1013 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.91□□□□□ -1.14
COL16A1Q07092 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 AC008745.1-201ENST00000604064 271 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AC000068.2-201ENST00000608816 460 ntBASIC7.91□□□□□ -1.14
COL16A1Q07092 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.91□□□□□ -1.14
COL16A1Q07092 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.91□□□□□ -1.14
COL16A1Q07092 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
COL16A1Q07092 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL16A1Q07092 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
COL16A1Q07092 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL16A1Q07092 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
COL16A1Q07092 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
COL16A1Q07092 ZNF658B-201ENST00000602828 3408 ntBASIC7.9□□□□□ -1.14
COL16A1Q07092 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.9□□□□□ -1.14
COL16A1Q07092 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
COL16A1Q07092 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
COL16A1Q07092 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.9□□□□□ -1.14
COL16A1Q07092 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms