Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC010975.3-201ENST00000618727 978 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
SOX4Q06945 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX4Q06945 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 AC097634.1-201ENST00000604491 2467 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SOX4Q06945 AC023490.2-201ENST00000359859 470 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 RNU6-796P-201ENST00000391086 107 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 SUMO2P13-201ENST00000403109 272 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AL079341.1-201ENST00000404701 1207 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 MTND4P3-201ENST00000417829 541 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC019178.2-201ENST00000423595 505 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX4Q06945 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 RPL3P11-201ENST00000434028 1146 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 MYL6P3-201ENST00000436904 432 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 BZW1P2-201ENST00000473537 826 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 MRPL57P6-201ENST00000506570 309 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 MRPS5P3-201ENST00000515577 166 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 RNU2-30P-201ENST00000516209 141 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC113191.1-201ENST00000517759 403 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX4Q06945 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 OR5G4P-201ENST00000525251 760 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 AC007537.1-201ENST00000539347 327 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX4Q06945 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX4Q06945 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX4Q06945 MIR378C-201ENST00000578683 81 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC010327.2-201ENST00000587647 488 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 VN1R81P-201ENST00000602085 372 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 DUXAP11-201ENST00000603858 526 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX4Q06945 AP000255.1-201ENST00000610276 676 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 AC024257.5-201ENST00000612739 531 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 MRPL57P3-201ENST00000619218 176 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX4Q06945 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 FLJ42393-201ENST00000623801 2270 ntBASIC7.49□□□□□ -1.21
SOX4Q06945 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SOX4Q06945 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
SOX4Q06945 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX4Q06945 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX4Q06945 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX4Q06945 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
SOX4Q06945 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 AC111188.2-201ENST00000529697 1387 ntBASIC7.48□□□□□ -1.21
SOX4Q06945 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX4Q06945 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX4Q06945 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms