Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC005753.1-201ENST00000623837 618 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 FRG1EP-201ENST00000634469 770 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 MAPK10-323ENST00000641493 3207 ntBASIC6.07□□□□□ -1.44
CLRN1P58418 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.07□□□□□ -1.44
CLRN1P58418 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLRN1P58418 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLRN1P58418 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.07□□□□□ -1.44
CLRN1P58418 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 NEK2P4-201ENST00000425793 1329 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AL512310.3-201ENST00000547023 1335 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 AL391422.1-201ENST00000402155 436 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 RN7SKP117-201ENST00000410175 264 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 AL663061.1-201ENST00000416625 580 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 RPS24P7-201ENST00000416921 246 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC008173.1-201ENST00000418901 264 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.06□□□□□ -1.44
CLRN1P58418 AL645936.2-201ENST00000430565 928 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 CRYGGP-201ENST00000443337 145 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 MEF2AP1-201ENST00000454867 863 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.06□□□□□ -1.44
CLRN1P58418 SNX18P23-201ENST00000510867 677 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AC093752.1-206ENST00000511823 336 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 MTCYBP44-201ENST00000514835 823 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.06□□□□□ -1.44
CLRN1P58418 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 ZNF971P-201ENST00000562068 1249 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AC091304.5-201ENST00000568969 158 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 CTSLP2-201ENST00000580501 394 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 MIR4428-201ENST00000584884 73 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 PRELID3BP3-201ENST00000584963 545 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC025165.5-201ENST00000602802 578 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 FXYD6P1-201ENST00000604857 285 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 AC022079.2-201ENST00000619739 566 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.06□□□□□ -1.44
CLRN1P58418 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 BX649567.1-201ENST00000642071 1134 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 CR382285.2-201ENST00000624662 1495 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
CLRN1P58418 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 AL591848.4-201ENST00000567832 3472 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.06□□□□□ -1.44
CLRN1P58418 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CLRN1P58418 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLRN1P58418 OR2A3P-202ENST00000641249 1776 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 AC093844.1-201ENST00000514910 1361 ntBASIC6.06□□□□□ -1.44
CLRN1P58418 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.05□□□□□ -1.44
CLRN1P58418 AC139426.3-201ENST00000605648 2059 ntBASIC6.05□□□□□ -1.44
CLRN1P58418 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
CLRN1P58418 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLRN1P58418 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms