Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC090888.3-201ENST00000558917 509 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 U1.25-201ENST00000614085 162 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 U1.34-201ENST00000618578 162 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 U1.31-201ENST00000620022 160 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC087269.2-201ENST00000641764 975 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.1□□□□□ -1.27
NEDD4P46934 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NEDD4P46934 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 AP000547.3-204ENST00000588548 2523 ntBASIC7.1□□□□□ -1.27
NEDD4P46934 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NEDD4P46934 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NEDD4P46934 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NEDD4P46934 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NEDD4P46934 RN7SKP77-201ENST00000363261 353 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RAB5CP1-201ENST00000395972 580 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RN7SKP166-201ENST00000410812 305 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 BX679664.2-201ENST00000439282 283 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 HLA-DPA3-207ENST00000454398 229 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 SETP4-201ENST00000455717 868 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.09□□□□□ -1.27
NEDD4P46934 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 AC104164.1-201ENST00000460282 590 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RN7SL352P-201ENST00000466002 277 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RN7SL193P-201ENST00000491708 276 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD4P46934 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.09□□□□□ -1.27
NEDD4P46934 OR5H7P-201ENST00000514084 930 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RN7SKP70-201ENST00000516655 271 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 OR7E158P-201ENST00000524483 910 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 AC007956.1-201ENST00000555623 542 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 RPA2P1-201ENST00000556557 721 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.09□□□□□ -1.27
NEDD4P46934 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD4P46934 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.09□□□□□ -1.27
NEDD4P46934 MIR1910-201ENST00000636955 80 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NEDD4P46934 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 AF287957.1-201ENST00000607368 1595 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 CASC19-238ENST00000641523 1558 ntBASIC7.09□□□□□ -1.27
NEDD4P46934 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
NEDD4P46934 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NEDD4P46934 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.09□□□□□ -1.28
NEDD4P46934 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NEDD4P46934 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.28
NEDD4P46934 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.28
NEDD4P46934 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
NEDD4P46934 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.09□□□□□ -1.28
NEDD4P46934 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NEDD4P46934 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NEDD4P46934 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 OOSP1-201ENST00000398992 1270 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.08□□□□□ -1.28
NEDD4P46934 KIF4CP-201ENST00000422742 1279 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 RPS7P3-201ENST00000443360 580 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 RPL5P10-201ENST00000445207 894 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 AL162739.1-201ENST00000450606 307 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.08□□□□□ -1.28
NEDD4P46934 CYP4F27P-201ENST00000514557 494 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 Y_RNA.667-201ENST00000516212 107 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.08□□□□□ -1.28
NEDD4P46934 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.08□□□□□ -1.28
NEDD4P46934 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.08□□□□□ -1.28
NEDD4P46934 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.08□□□□□ -1.28
NEDD4P46934 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.08□□□□□ -1.28
NEDD4P46934 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
NEDD4P46934 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.08□□□□□ -1.28
NEDD4P46934 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 QRSL1P1-201ENST00000400977 1540 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NEDD4P46934 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 SNX18P3-202ENST00000565670 1750 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms