Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.33□□□□□ -1.4
HTTP42858 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 AL022237.1-201ENST00000446663 358 ntBASIC6.33□□□□□ -1.4
HTTP42858 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.33□□□□□ -1.4
HTTP42858 MIR6780A-201ENST00000615089 68 ntBASIC6.33□□□□□ -1.4
HTTP42858 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 AC104964.3-201ENST00000606115 2860 ntBASIC6.33□□□□□ -1.4
HTTP42858 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 AC011369.2-201ENST00000624423 1567 ntBASIC6.33□□□□□ -1.4
HTTP42858 SNORA67-201ENST00000384423 137 ntBASIC6.33□□□□□ -1.4
HTTP42858 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.33□□□□□ -1.4
HTTP42858 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 AC019205.1-201ENST00000421830 730 ntBASIC6.33□□□□□ -1.4
HTTP42858 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.33□□□□□ -1.4
HTTP42858 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 AL110118.1-201ENST00000553543 400 ntBASIC6.33□□□□□ -1.4
HTTP42858 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.33□□□□□ -1.4
HTTP42858 MIR4260-201ENST00000583107 67 ntBASIC6.33□□□□□ -1.4
HTTP42858 AC087283.1-201ENST00000604029 1074 ntBASIC6.33□□□□□ -1.4
HTTP42858 AL392048.1-201ENST00000613946 534 ntBASIC6.33□□□□□ -1.4
HTTP42858 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.33□□□□□ -1.4
HTTP42858 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC6.33□□□□□ -1.4
HTTP42858 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.33□□□□□ -1.4
HTTP42858 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
HTTP42858 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HTTP42858 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HTTP42858 MIR133B-201ENST00000362210 119 ntBASIC6.32□□□□□ -1.4
HTTP42858 COX6B1P1-201ENST00000415962 213 ntBASIC6.32□□□□□ -1.4
HTTP42858 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.32□□□□□ -1.4
HTTP42858 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
HTTP42858 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.32□□□□□ -1.4
HTTP42858 AC069307.1-201ENST00000602820 447 ntBASIC6.32□□□□□ -1.4
HTTP42858 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.32□□□□□ -1.4
HTTP42858 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 AC007938.2-201ENST00000604666 2634 ntBASIC6.32□□□□□ -1.4
HTTP42858 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HTTP42858 EDA-213ENST00000616899 4643 ntTSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 RNU1-43P-201ENST00000365052 165 ntBASIC6.32□□□□□ -1.4
HTTP42858 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 SKA2-207ENST00000583380 583 ntTSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HTTP42858 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HTTP42858 AL133388.1-201ENST00000404509 287 ntBASIC6.32□□□□□ -1.4
HTTP42858 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.32□□□□□ -1.4
HTTP42858 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.32□□□□□ -1.4
HTTP42858 AC011453.2-201ENST00000603737 729 ntBASIC6.32□□□□□ -1.4
HTTP42858 EIF3FP1-201ENST00000613970 806 ntBASIC6.32□□□□□ -1.4
HTTP42858 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.32□□□□□ -1.4
HTTP42858 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
HTTP42858 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HTTP42858 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HTTP42858 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.31□□□□□ -1.4
HTTP42858 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HTTP42858 AC011447.4-201ENST00000587562 111 ntBASIC6.31□□□□□ -1.4
HTTP42858 AC245389.2-201ENST00000616023 576 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms