Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC114876.1-201ENST00000490962 1366 ntBASIC5.89□□□□□ -1.47
PTPN6P29350 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTPN6P29350 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN6P29350 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PTPN6P29350 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 RNA5SP77-201ENST00000365394 120 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 AL121977.1-201ENST00000401636 979 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 CBX1P3-201ENST00000413296 527 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN6P29350 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN6P29350 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 AC097359.1-201ENST00000447946 463 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 RANP2-201ENST00000456833 229 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 RN7SL643P-201ENST00000471845 291 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 RN7SKP183-201ENST00000517169 324 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 OR4A41P-201ENST00000533053 928 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN6P29350 AC121758.1-202ENST00000556917 658 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
PTPN6P29350 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 SNORA74.4-201ENST00000607595 199 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 AC021422.1-201ENST00000621212 473 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 AL122023.1-201ENST00000622847 530 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 AC010325.3-201ENST00000641084 394 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 OR7A1P-202ENST00000641542 1158 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 AC123912.3-201ENST00000600907 1367 ntBASIC5.88□□□□□ -1.47
PTPN6P29350 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
PTPN6P29350 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN6P29350 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN6P29350 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC092070.2-203ENST00000598377 3644 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 NAMPTP1-201ENST00000440465 2514 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 AC092724.1-201ENST00000624623 3397 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC107977.1-201ENST00000355745 939 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 RN7SKP171-201ENST00000364417 303 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 YWHAZP4-201ENST00000392459 708 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AC003045.1-201ENST00000398779 713 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 PSMA6P1-201ENST00000400275 741 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN6P29350 RPL21P50-201ENST00000417698 477 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AC002127.1-201ENST00000421305 225 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC092651.1-201ENST00000426110 312 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.87□□□□□ -1.47
PTPN6P29350 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 HMGN1P16-201ENST00000508308 283 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 RNA5SP418-201ENST00000515951 117 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC244502.2-201ENST00000543361 851 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC020916.2-201ENST00000591242 360 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 DYNLL1P1-201ENST00000595442 269 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 AL591167.1-201ENST00000607321 456 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AL359091.2-201ENST00000609303 556 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN6P29350 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
PTPN6P29350 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 AC090181.3-201ENST00000624777 1514 ntBASIC5.87□□□□□ -1.47
PTPN6P29350 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN6P29350 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PTPN6P29350 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PTPN6P29350 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
PTPN6P29350 AL359976.1-201ENST00000418655 3528 ntBASIC5.86□□□□□ -1.47
PTPN6P29350 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTPN6P29350 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms