Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 TDGP1-201ENST00000543961 1229 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 HMGN2P47-201ENST00000559378 272 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.98□□□□□ -1.45
ABCD3P28288 MIR4433B-201ENST00000581329 102 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.98□□□□□ -1.45
ABCD3P28288 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.98□□□□□ -1.45
ABCD3P28288 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.98□□□□□ -1.45
ABCD3P28288 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ABCD3P28288 AP000720.1-201ENST00000625091 483 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.98□□□□□ -1.45
ABCD3P28288 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 AP002370.1-201ENST00000528055 1602 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 SAGE3P-201ENST00000619800 1635 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 AC107021.2-201ENST00000567714 2095 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ABCD3P28288 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.98□□□□□ -1.45
ABCD3P28288 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.98□□□□□ -1.45
ABCD3P28288 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ABCD3P28288 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.98□□□□□ -1.45
ABCD3P28288 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ABCD3P28288 NEK2P2-201ENST00000438441 1338 ntBASIC5.98□□□□□ -1.45
ABCD3P28288 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 RNA5SP512-201ENST00000364550 120 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL050335.1-201ENST00000396909 869 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.97□□□□□ -1.45
ABCD3P28288 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 GAPDHP75-201ENST00000433910 943 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC234771.2-201ENST00000445718 597 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL161722.1-201ENST00000446972 1032 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL451063.1-201ENST00000450164 1133 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL353718.1-201ENST00000451028 517 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 RPS7P10-201ENST00000464254 603 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC091965.3-201ENST00000506236 208 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC073581.1-201ENST00000519036 575 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AL133399.1-201ENST00000527476 298 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 BTG1P1-201ENST00000540396 508 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC023968.1-201ENST00000560719 475 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 SNORD39.2-201ENST00000579995 76 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 BMS1P7-201ENST00000602440 1052 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AC092474.3-201ENST00000603022 568 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AC089999.3-201ENST00000622440 577 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AC105105.5-201ENST00000622635 1294 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 AC079298.2-201ENST00000623885 459 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 LINC02495-203ENST00000636704 242 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 AC007159.1-201ENST00000566529 4706 ntBASIC5.97□□□□□ -1.45
ABCD3P28288 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.97□□□□□ -1.45
ABCD3P28288 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.97□□□□□ -1.45
ABCD3P28288 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
ABCD3P28288 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ABCD3P28288 AC018628.1-201ENST00000624147 3819 ntBASIC5.96□□□□□ -1.45
ABCD3P28288 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.96□□□□□ -1.45
ABCD3P28288 AL033543.1-201ENST00000623440 13454 ntBASIC5.96□□□□□ -1.45
ABCD3P28288 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms