Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.22□□□□□ -1.09
RFX1P22670 AL353795.1-201ENST00000439134 1775 ntBASIC8.22□□□□□ -1.09
RFX1P22670 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
RFX1P22670 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.22□□□□□ -1.09
RFX1P22670 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RFX1P22670 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
RFX1P22670 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.21□□□□□ -1.09
RFX1P22670 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
RFX1P22670 AC073429.2-201ENST00000569694 1444 ntBASIC8.21□□□□□ -1.09
RFX1P22670 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.21□□□□□ -1.09
RFX1P22670 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.21□□□□□ -1.09
RFX1P22670 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
RFX1P22670 AC011008.2-201ENST00000624866 3352 ntBASIC8.21□□□□□ -1.09
RFX1P22670 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.21□□□□□ -1.09
RFX1P22670 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
RFX1P22670 AC005539.1-201ENST00000443768 1479 ntBASIC8.21□□□□□ -1.09
RFX1P22670 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
RFX1P22670 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
RFX1P22670 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.21□□□□□ -1.09
RFX1P22670 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 RNU6-931P-201ENST00000363850 107 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RNU6-707P-201ENST00000364647 95 ntBASIC8.21□□□□□ -1.1
RFX1P22670 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 Y_RNA.560-201ENST00000384689 102 ntBASIC8.21□□□□□ -1.1
RFX1P22670 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.21□□□□□ -1.1
RFX1P22670 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AL161742.1-201ENST00000418154 584 ntBASIC8.21□□□□□ -1.1
RFX1P22670 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC8.21□□□□□ -1.1
RFX1P22670 AC009299.1-201ENST00000429684 717 ntBASIC8.21□□□□□ -1.1
RFX1P22670 NMNAT1P2-201ENST00000435192 860 ntBASIC8.21□□□□□ -1.1
RFX1P22670 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AC231532.1-201ENST00000438584 312 ntBASIC8.21□□□□□ -1.1
RFX1P22670 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.21□□□□□ -1.1
RFX1P22670 GTF3AP5-201ENST00000442645 697 ntBASIC8.21□□□□□ -1.1
RFX1P22670 BMI1P1-201ENST00000445879 941 ntBASIC8.21□□□□□ -1.1
RFX1P22670 TDGF1P6-201ENST00000463873 448 ntBASIC8.21□□□□□ -1.1
RFX1P22670 CCDC75P1-201ENST00000469247 791 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RN7SL58P-201ENST00000473445 294 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RPL7P18-201ENST00000478965 734 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RPS6P4-201ENST00000494693 758 ntBASIC8.21□□□□□ -1.1
RFX1P22670 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 LINC01085-203ENST00000511195 326 ntBASIC8.21□□□□□ -1.1
RFX1P22670 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 RNA5SP96-201ENST00000516041 107 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.21□□□□□ -1.1
RFX1P22670 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.21□□□□□ -1.1
RFX1P22670 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
RFX1P22670 BLZF2P-201ENST00000553776 1130 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 HIGD1AP17-201ENST00000554576 276 ntBASIC8.21□□□□□ -1.1
RFX1P22670 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC8.21□□□□□ -1.1
RFX1P22670 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.21□□□□□ -1.1
RFX1P22670 MIR5192-201ENST00000579892 92 ntBASIC8.21□□□□□ -1.1
RFX1P22670 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 AC010327.2-201ENST00000587647 488 ntBASIC8.21□□□□□ -1.1
RFX1P22670 RBM11P1-201ENST00000604951 799 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AL592221.1-201ENST00000605266 382 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AC097505.1-201ENST00000610199 565 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AC023310.4-201ENST00000613130 650 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 pRNA.9-201ENST00000618609 89 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AL031667.3-201ENST00000620124 655 ntBASIC8.21□□□□□ -1.1
RFX1P22670 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.21□□□□□ -1.1
RFX1P22670 AC241377.2-202ENST00000636462 997 ntBASIC8.21□□□□□ -1.1
RFX1P22670 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.21□□□□□ -1.1
RFX1P22670 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 HSPA8P11-201ENST00000508840 1898 ntBASIC8.21□□□□□ -1.1
RFX1P22670 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 MAPK10-279ENST00000641157 2449 ntBASIC8.21□□□□□ -1.1
RFX1P22670 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.21□□□□□ -1.1
RFX1P22670 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.21□□□□□ -1.1
RFX1P22670 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
RFX1P22670 CASC19-206ENST00000641028 1430 ntBASIC8.2□□□□□ -1.1
RFX1P22670 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
RFX1P22670 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
RFX1P22670 IL6STP1-201ENST00000346911 1020 ntBASIC8.2□□□□□ -1.1
RFX1P22670 SNORD15A-201ENST00000384214 148 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms