Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNA5SP92-201ENST00000516437 110 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
TOP2AP11388 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 AL136295.6-201ENST00000610486 658 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 AC021766.1-201ENST00000624404 741 ntBASIC10.27□□□□□ -0.77
TOP2AP11388 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.27□□□□□ -0.77
TOP2AP11388 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC10.26□□□□□ -0.77
TOP2AP11388 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
TOP2AP11388 AL355377.1-201ENST00000621125 1653 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
TOP2AP11388 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.26□□□□□ -0.77
TOP2AP11388 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC10.26□□□□□ -0.77
TOP2AP11388 METTL15P3-201ENST00000415522 1221 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 AL139148.1-201ENST00000427122 680 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 AC011742.2-201ENST00000443818 352 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 OTX2P1-201ENST00000450956 354 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC10.26□□□□□ -0.77
TOP2AP11388 RAB28P2-201ENST00000454299 641 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 AC026254.2-201ENST00000475295 371 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 EIF1P7-201ENST00000487533 337 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 AC004890.3-201ENST00000605566 1095 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 AC239803.2-201ENST00000610161 430 ntBASIC10.26□□□□□ -0.77
TOP2AP11388 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
TOP2AP11388 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC10.26□□□□□ -0.77
TOP2AP11388 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.25□□□□□ -0.77
TOP2AP11388 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
TOP2AP11388 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC10.25□□□□□ -0.77
TOP2AP11388 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC10.25□□□□□ -0.77
TOP2AP11388 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC10.25□□□□□ -0.77
TOP2AP11388 GAPDHP58-201ENST00000438477 1006 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC10.25□□□□□ -0.77
TOP2AP11388 OR7E116P-201ENST00000448529 957 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 RPL23AP40-201ENST00000487630 390 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 AL035690.1-201ENST00000490892 383 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 SCARNA6.1-201ENST00000516989 238 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC10.25□□□□□ -0.77
TOP2AP11388 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 THAP12P9-201ENST00000503971 2360 ntBASIC10.25□□□□□ -0.77
TOP2AP11388 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
TOP2AP11388 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC10.25□□□□□ -0.77
TOP2AP11388 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
TOP2AP11388 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 MIR130A-201ENST00000385274 89 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 AC006335.2-201ENST00000437993 330 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 AC019185.1-201ENST00000442718 389 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 AC079922.1-201ENST00000443291 359 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC10.24□□□□□ -0.77
TOP2AP11388 CCDC11P1-201ENST00000503137 1162 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC10.24□□□□□ -0.77
TOP2AP11388 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC10.24□□□□□ -0.77
TOP2AP11388 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC10.24□□□□□ -0.77
TOP2AP11388 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 AL592429.1-201ENST00000403909 1473 ntBASIC10.24□□□□□ -0.77
TOP2AP11388 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC10.24□□□□□ -0.77
TOP2AP11388 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
TOP2AP11388 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
TOP2AP11388 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC10.24□□□□□ -0.77
TOP2AP11388 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
TOP2AP11388 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC10.23□□□□□ -0.77
TOP2AP11388 AC253576.1-201ENST00000511645 1156 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC10.23□□□□□ -0.77
TOP2AP11388 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.23□□□□□ -0.77
TOP2AP11388 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC10.23□□□□□ -0.77
TOP2AP11388 HAUS8P1-201ENST00000549005 542 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC10.23□□□□□ -0.77
TOP2AP11388 AC063977.5-201ENST00000601044 974 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 AL139407.1-201ENST00000613826 1175 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC10.23□□□□□ -0.77
TOP2AP11388 AL353763.1-201ENST00000624467 1628 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC10.23□□□□□ -0.77
TOP2AP11388 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TOP2AP11388 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
TOP2AP11388 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
TOP2AP11388 CD86-204ENST00000469710 1604 ntTSL 2 BASIC10.23□□□□□ -0.77
TOP2AP11388 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TOP2AP11388 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
TOP2AP11388 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
TOP2AP11388 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC10.23□□□□□ -0.77
TOP2AP11388 CR383656.5-201ENST00000547616 1340 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC10.23□□□□□ -0.77
TOP2AP11388 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC10.23□□□□□ -0.77
TOP2AP11388 AL355032.1-201ENST00000472981 438 ntBASIC10.23□□□□□ -0.77
TOP2AP11388 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms