Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC115283.1-201ENST00000427353 400 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 RPS10P21-201ENST00000430654 475 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 SNRPFP2-201ENST00000440710 251 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AL627224.1-201ENST00000448334 444 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 OR52I1-201ENST00000450052 1050 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 PSMA6P2-201ENST00000457574 686 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC096743.1-201ENST00000485172 319 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC104685.1-201ENST00000502445 371 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 ASNSP4-201ENST00000511103 447 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 SNRPCP6-201ENST00000528310 210 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 ZDHHC20P3-201ENST00000531576 336 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC124891.1-201ENST00000536322 519 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC140063.1-201ENST00000541343 259 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AL512310.9-201ENST00000553311 948 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC020914.7-201ENST00000594477 545 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC079315.1-201ENST00000602952 623 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC099785.1-201ENST00000605697 437 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 Six3os1_1.1-201ENST00000620900 87 ntBASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CSB-PGBD3P0DP91 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 ZNF806-201ENST00000438300 1774 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 RNU5B-4P-201ENST00000363508 111 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 PPIAP26-201ENST00000377951 522 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AP002784.2-201ENST00000397300 549 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 PRELID1P1-201ENST00000403549 660 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AL356320.2-201ENST00000417263 507 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 VNN3-210ENST00000450865 596 ntTSL 4 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 CBX1P5-201ENST00000475330 559 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC018797.1-201ENST00000510791 255 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 RNA5SP287-201ENST00000516358 103 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC084121.1-201ENST00000533882 835 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 HNRNPA3P9-201ENST00000604913 979 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AL357078.3-201ENST00000607528 618 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 RN7SL261P-201ENST00000613441 282 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC105105.5-201ENST00000622635 1294 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC017037.3-201ENST00000625016 472 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 AC010325.3-201ENST00000641084 394 ntBASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.15□□□□□ -0.94
CSB-PGBD3P0DP91 TNFSF15-201ENST00000374044 2789 ntBASIC9.15□□□□□ -0.95
CSB-PGBD3P0DP91 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms