Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.83□□□□□ -1.48
HCN1O60741 POU5F1P5-201ENST00000445059 658 ntBASIC5.83□□□□□ -1.48
HCN1O60741 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 AC104339.1-201ENST00000465478 348 ntBASIC5.83□□□□□ -1.48
HCN1O60741 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 GM2AP2-201ENST00000491764 562 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 RNU6-964P-201ENST00000516524 69 ntBASIC5.83□□□□□ -1.48
HCN1O60741 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 AC011853.1-201ENST00000518911 454 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AC084121.1-201ENST00000533882 835 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 AL121579.2-201ENST00000555466 590 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AL845552.1-201ENST00000556820 323 ntBASIC5.83□□□□□ -1.48
HCN1O60741 HMGN2P47-201ENST00000559378 272 ntBASIC5.83□□□□□ -1.48
HCN1O60741 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.83□□□□□ -1.48
HCN1O60741 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.83□□□□□ -1.48
HCN1O60741 AL445649.1-201ENST00000615941 691 ntBASIC5.83□□□□□ -1.48
HCN1O60741 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.83□□□□□ -1.48
HCN1O60741 SAGE3P-201ENST00000619800 1635 ntBASIC5.83□□□□□ -1.48
HCN1O60741 CASC19-246ENST00000641625 1606 ntBASIC5.83□□□□□ -1.48
HCN1O60741 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.83□□□□□ -1.48
HCN1O60741 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 SHQ1P1-201ENST00000437111 1544 ntBASIC5.83□□□□□ -1.48
HCN1O60741 AL592429.1-201ENST00000403909 1473 ntBASIC5.83□□□□□ -1.48
HCN1O60741 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.83□□□□□ -1.48
HCN1O60741 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HCN1O60741 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 SNORD16-201ENST00000362803 99 ntBASIC5.82□□□□□ -1.48
HCN1O60741 SNORD35A-201ENST00000363389 86 ntBASIC5.82□□□□□ -1.48
HCN1O60741 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HCN1O60741 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.82□□□□□ -1.48
HCN1O60741 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.82□□□□□ -1.48
HCN1O60741 YWHAZP6-201ENST00000399764 738 ntBASIC5.82□□□□□ -1.48
HCN1O60741 RPL23AP17-201ENST00000401064 499 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.82□□□□□ -1.48
HCN1O60741 RPL7AP14-201ENST00000424041 802 ntBASIC5.82□□□□□ -1.48
HCN1O60741 OSTCP4-201ENST00000424397 449 ntBASIC5.82□□□□□ -1.48
HCN1O60741 GAPDHP59-201ENST00000435908 267 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 AL590399.4-201ENST00000436561 601 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AL138899.2-201ENST00000439139 499 ntBASIC5.82□□□□□ -1.48
HCN1O60741 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.82□□□□□ -1.48
HCN1O60741 AL022237.1-201ENST00000446663 358 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.82□□□□□ -1.48
HCN1O60741 snoU13.29-201ENST00000459370 104 ntBASIC5.82□□□□□ -1.48
HCN1O60741 RN7SL254P-201ENST00000460609 284 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.82□□□□□ -1.48
HCN1O60741 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.82□□□□□ -1.48
HCN1O60741 RNA5SP441-201ENST00000516809 88 ntBASIC5.82□□□□□ -1.48
HCN1O60741 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 NPIPB14P-203ENST00000532298 987 ntBASIC5.82□□□□□ -1.48
HCN1O60741 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.82□□□□□ -1.48
HCN1O60741 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.82□□□□□ -1.48
HCN1O60741 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.82□□□□□ -1.48
HCN1O60741 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.82□□□□□ -1.48
HCN1O60741 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.82□□□□□ -1.48
HCN1O60741 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HCN1O60741 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HCN1O60741 AC027575.3-201ENST00000583058 2747 ntBASIC5.82□□□□□ -1.48
HCN1O60741 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.81□□□□□ -1.48
HCN1O60741 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HCN1O60741 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HCN1O60741 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.81□□□□□ -1.48
HCN1O60741 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HCN1O60741 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.81□□□□□ -1.48
HCN1O60741 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HCN1O60741 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.81□□□□□ -1.48
HCN1O60741 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.81□□□□□ -1.48
HCN1O60741 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HCN1O60741 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.81□□□□□ -1.48
HCN1O60741 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HCN1O60741 AC083837.1-201ENST00000565297 2994 ntBASIC5.81□□□□□ -1.48
HCN1O60741 BIN2P1-201ENST00000504996 1530 ntBASIC5.81□□□□□ -1.48
HCN1O60741 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.81□□□□□ -1.48
HCN1O60741 RNA5SP279-201ENST00000365513 117 ntBASIC5.81□□□□□ -1.48
HCN1O60741 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms