Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 IGHV3-32-201ENST00000519182 355 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 OR5AK1P-201ENST00000524837 922 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC005730.3-201ENST00000583067 366 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AL109936.2-201ENST00000605350 650 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC104458.1-201ENST00000608243 463 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC023310.4-201ENST00000613130 650 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 TUG1_3.1-201ENST00000616187 237 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC245033.3-201ENST00000617986 224 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 CLUHP10-201ENST00000631979 980 ntBASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHGA11Q9Y5H2 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AP002001.2-201ENST00000529025 1469 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC112255.1-201ENST00000624070 2493 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008555.1-201ENST00000561778 2757 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AL590763.1-201ENST00000398297 1545 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL11P4-201ENST00000332269 436 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AL161787.1-201ENST00000401543 174 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC093084.1-201ENST00000424233 687 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL5P6-201ENST00000425640 886 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC069154.1-201ENST00000432914 542 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 FMO7P-201ENST00000436045 768 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AL136454.1-201ENST00000443181 466 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RBMY3AP-201ENST00000449381 1145 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092001.1-201ENST00000453012 261 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC096915.1-201ENST00000456185 512 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 UBDP1-202ENST00000457888 382 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC117392.1-201ENST00000487061 596 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL434P-201ENST00000495872 271 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 SETP14-201ENST00000497538 873 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC105252.1-201ENST00000503089 286 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC093824.1-201ENST00000508796 343 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC114786.3-201ENST00000509304 705 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC091839.1-201ENST00000513087 269 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AP001804.2-201ENST00000533932 910 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC068305.2-201ENST00000550567 1205 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 GTF2IP22-201ENST00000554443 182 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 MT1L-202ENST00000566367 78 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL785P-201ENST00000578437 253 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC138761.2-201ENST00000583878 343 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC005034.5-201ENST00000604219 466 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AL390208.1-201ENST00000605885 644 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC104260.1-201ENST00000616660 539 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC126177.8-201ENST00000618339 1015 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 CU638689.2-201ENST00000623809 818 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms