Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 EDA-213ENST00000616899 4643 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RNU105B-201ENST00000364478 208 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 HNRNPRP2-201ENST00000528421 743 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MIR3158-1-201ENST00000583596 81 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC096992.2-201ENST00000609553 1684 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 Z97832.2-201ENST00000605896 4261 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 OR5W1P-201ENST00000423705 938 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC104971.1-201ENST00000495117 578 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC015720.2-201ENST00000567709 334 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MIR7111-201ENST00000619751 72 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AL078599.1-201ENST00000402075 293 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AL391358.1-201ENST00000605342 190 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC112694.2-201ENST00000623697 768 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC011944.2-201ENST00000624440 683 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 AC080128.2-201ENST00000641520 11863 ntBASIC2.38□□□□□ -2.03
MACF1Q9UPN3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
MACF1Q9UPN3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 CASC19-221ENST00000641309 1382 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 snoU13.1-201ENST00000459157 104 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RN7SL429P-201ENST00000479090 223 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RN7SL489P-201ENST00000486185 223 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RN7SL327P-201ENST00000488659 223 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RNU1-45P-201ENST00000517191 141 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 RN7SL853P-201ENST00000617250 223 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms