Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RIMBP3Q9UFD9 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 RPS4XP5-201ENST00000419038 768 ntBASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AP000547.1-201ENST00000454360 617 ntBASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 MRPS21P7-201ENST00000566937 238 ntBASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AC005225.5-201ENST00000623547 2225 ntBASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 APP-206ENST00000359726 3294 ntTSL 2 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
RIMBP3Q9UFD9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 NPM1P40-201ENST00000412758 733 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 RN7SL354P-201ENST00000469282 294 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AC099654.6-201ENST00000636487 512 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 SNORA11F-201ENST00000408237 128 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AL357752.1-201ENST00000412817 349 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 AC012616.1-201ENST00000600294 197 ntBASIC9.31□□□□□ -0.92
RIMBP3Q9UFD9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 INTS6P1-201ENST00000504674 2530 ntBASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 CNOT7P1-201ENST00000429006 852 ntBASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 AC092375.1-201ENST00000550410 637 ntBASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 AC119403.2-201ENST00000590960 598 ntBASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC9.3□□□□□ -0.92
RIMBP3Q9UFD9 PFKM-232ENST00000629846 381 ntTSL 4 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms