Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 TMCC1P1-201ENST00000518897 1980 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC019178.1-201ENST00000392337 440 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL353692.2-201ENST00000407054 335 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL023284.3-201ENST00000407767 334 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 MTCYBP32-201ENST00000427945 1084 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 BMP6P1-201ENST00000431230 679 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 MRPL50P1-201ENST00000431951 384 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC003989.1-201ENST00000434569 565 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 CLIC4P1-201ENST00000453177 535 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL079303.1-201ENST00000486611 463 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 RN7SL37P-201ENST00000490461 307 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 MTND6P8-201ENST00000503471 522 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC091965.3-201ENST00000506236 208 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 MTCO1P31-201ENST00000506355 492 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC131392.1-201ENST00000506490 633 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC112198.4-201ENST00000515450 351 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 RN7SKP196-201ENST00000516267 345 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC067904.2-201ENST00000517322 1283 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 DPPA3P2-202ENST00000557188 1219 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC245884.10-201ENST00000597355 337 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC012175.1-201ENST00000603755 531 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 RPS4XP21-201ENST00000603814 750 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL158050.2-201ENST00000605336 568 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC015849.2-201ENST00000605738 409 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 TCL6_3.1-201ENST00000619064 137 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC004836.1-201ENST00000623032 634 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC005514.1-201ENST00000623521 208 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC007683.2-201ENST00000624681 714 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL132640.3-201ENST00000630473 177 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC027559.1-201ENST00000636288 271 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AL121936.2-201ENST00000641935 662 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC005332.9-201ENST00000620266 2921 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC010624.4-201ENST00000597606 1351 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 AC011504.1-201ENST00000623331 4103 ntBASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
TRIM54Q9BYV2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 AC004023.1-201ENST00000561473 1744 ntBASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 OR4K17-201ENST00000315543 1032 ntBASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 RN7SKP118-201ENST00000364331 330 ntBASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 ATP5F1P6-201ENST00000402768 767 ntBASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM54Q9BYV2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms