Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC079949.2-201ENST00000617117 2933 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL049780.3-201ENST00000624612 1583 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL008721.2-201ENST00000609475 3754 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 CTBP2P2-201ENST00000434549 1334 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 C7orf71-201ENST00000409974 1956 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC007996.1-201ENST00000620414 2821 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC016909.2-201ENST00000424510 1711 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC013444.1-201ENST00000428909 1904 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 COX6C-201ENST00000297564 433 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 Y_RNA.556-201ENST00000384677 113 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MIR514A2-201ENST00000385131 88 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MIR514A3-201ENST00000385132 88 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RNU1-149P-201ENST00000390870 161 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 HMGB1P17-201ENST00000403495 628 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL096800.1-201ENST00000405326 893 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RNA5SP29-201ENST00000410988 106 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RN7SKP108-201ENST00000411367 328 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 SNRPCP19-201ENST00000420809 460 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC079779.2-202ENST00000427831 392 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RPL23AP30-201ENST00000432419 501 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC092106.2-201ENST00000436597 487 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC114755.4-201ENST00000439114 443 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC008074.1-201ENST00000441630 723 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 FAM103A2P-201ENST00000444122 354 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RPSAP76-201ENST00000444599 853 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MTND3P16-201ENST00000452205 344 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 MTCO3P10-201ENST00000455912 772 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 Y_RNA.653-201ENST00000459091 95 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 APOOP2-201ENST00000461561 539 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC112719.1-201ENST00000477971 315 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC003029.1-201ENST00000493495 603 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC044787.1-201ENST00000497325 792 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 FAM197Y9-203ENST00000505707 345 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 GAPDHP61-201ENST00000507324 1005 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 FAM206BP-201ENST00000510179 541 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC095059.2-201ENST00000510601 933 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC022296.1-201ENST00000512176 682 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RNU6-976P-201ENST00000516086 111 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 Y_RNA.665-201ENST00000516177 98 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RNU6-714P-201ENST00000516963 103 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 RNU6-410P-201ENST00000517006 107 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 HMGB1P19-201ENST00000517578 577 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC009812.2-201ENST00000517657 457 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 IGKV3-34-201ENST00000521692 293 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC104561.2-201ENST00000523257 519 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AP000676.2-201ENST00000529711 301 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AP000889.2-201ENST00000532684 490 ntBASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.53□□□□□ -1.68
KRTAP3-1Q9BYR8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms