Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 AL590410.1-201ENST00000617925 333 ntBASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 AC092692.1-201ENST00000623625 2595 ntBASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NHLRC1Q6VVB1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC125238.2-201ENST00000430003 1440 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 SNORD8-201ENST00000363915 110 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 RNA5SP478-201ENST00000364657 115 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 RN7SKP237-201ENST00000364663 301 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL360271.1-201ENST00000395679 510 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL157702.1-201ENST00000398764 426 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 RNA5SP198-201ENST00000410376 127 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 RPS7P14-201ENST00000426405 583 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 GAPDHP19-201ENST00000431768 1005 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC097523.2-201ENST00000435551 652 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 NPM1P23-201ENST00000440193 849 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AGGF1P3-201ENST00000493675 1213 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 RNA5SP418-201ENST00000515951 117 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 HMGN1P26-201ENST00000558737 303 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 MTATP6P25-201ENST00000574491 261 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 MIR212-201ENST00000586026 110 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AC063977.7-201ENST00000594454 337 ntBASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.65□□□□□ -1.5
NHLRC1Q6VVB1 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 AC245100.2-201ENST00000454544 1679 ntBASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NHLRC1Q6VVB1 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 RNU4-23P-201ENST00000362839 140 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 RN7SKP129-201ENST00000410288 299 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 TMA16P2-201ENST00000413187 601 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 SEPT7P8-201ENST00000413308 775 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC234781.4-201ENST00000419384 244 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 DNAJC19P5-201ENST00000443295 316 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 MORF4-201ENST00000447135 971 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 RNU6-775P-201ENST00000459318 96 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 SNRPCP11-201ENST00000492453 205 ntBASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.64□□□□□ -1.51
NHLRC1Q6VVB1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms