Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 FO393419.1-201ENST00000443746 355 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 TCEA1P1-201ENST00000449716 880 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 RPL5P15-201ENST00000475870 897 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC135999.1-201ENST00000478962 479 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC007182.2-201ENST00000489251 402 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 MYADML-203ENST00000491596 951 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 HMGB3P15-201ENST00000507326 574 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 RN7SKP256-201ENST00000517201 314 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC107953.1-201ENST00000522216 297 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC089998.3-201ENST00000549715 493 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC012065.3-201ENST00000602736 439 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC243830.2-201ENST00000618067 630 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 RHOXF1P2-201ENST00000635431 502 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 NOX4-210ENST00000527956 2379 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC9□□□□□ -0.97
VARS2Q5ST30 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 AC108467.2-201ENST00000617640 1597 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC126474.2-201ENST00000623268 1750 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 AL138847.1-201ENST00000258651 546 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 RNU1-47P-201ENST00000362966 163 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 RNA5SP263-201ENST00000363376 128 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 RNU6-74P-201ENST00000384235 107 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 RNU6-1297P-201ENST00000384415 104 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 Y_RNA.556-201ENST00000384677 113 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 CNN2P7-201ENST00000400583 932 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 MIR1305-201ENST00000408300 86 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 HMGB3P2-201ENST00000411913 584 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 GUSBP4-201ENST00000423899 672 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 AL359672.1-201ENST00000442302 409 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 RN7SL403P-201ENST00000481783 305 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 MTND6P17-201ENST00000511811 519 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 TPM3P3-201ENST00000521343 354 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 OR4C7P-201ENST00000533375 919 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC055876.1-202ENST00000567053 138 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 MIR4262-201ENST00000578394 54 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 APOC2-202ENST00000585786 880 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC011444.4-201ENST00000586415 418 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 APOC2-204ENST00000591597 447 ntTSL 5 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC020914.6-201ENST00000594327 272 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 AP004247.4-201ENST00000608484 942 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC9□□□□□ -0.97
VARS2Q5ST30 AC098479.1-201ENST00000609225 154 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 AC090510.2-201ENST00000617465 629 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 AC138649.5-201ENST00000637456 137 ntBASIC9□□□□□ -0.97
VARS2Q5ST30 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC9□□□□□ -0.97
VARS2Q5ST30 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VARS2Q5ST30 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC9□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms