Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLTCQ00610 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLTCQ00610 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLTCQ00610 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.62□□□□□ -1.03
CLTCQ00610 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 RNA5SP131-201ENST00000365452 119 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CLTCQ00610 AL663074.2-201ENST00000440621 479 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 CBX1P2-201ENST00000453841 458 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8.62□□□□□ -1.03
CLTCQ00610 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CLTCQ00610 MIR5095-201ENST00000578844 88 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
CLTCQ00610 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CLTCQ00610 AP000866.6-201ENST00000638898 3579 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.62□□□□□ -1.03
CLTCQ00610 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.62□□□□□ -1.03
CLTCQ00610 AC023421.1-201ENST00000590535 1785 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 AL109941.1-201ENST00000401925 229 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 Z80107.2-201ENST00000445127 392 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 AC009120.1-201ENST00000493458 473 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.62□□□□□ -1.03
CLTCQ00610 AL390318.1-201ENST00000624564 687 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLTCQ00610 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
CLTCQ00610 SALL4P7-201ENST00000555779 3120 ntBASIC8.62□□□□□ -1.03
CLTCQ00610 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CLTCQ00610 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 CTAGE11P-201ENST00000451540 2353 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.61□□□□□ -1.03
CLTCQ00610 RNU1-106P-201ENST00000384382 164 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 RN7SKP166-201ENST00000410812 305 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.61□□□□□ -1.03
CLTCQ00610 HMGA1P8-201ENST00000414130 321 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 AL590762.4-201ENST00000425885 253 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 AC092017.2-201ENST00000427600 362 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 RPS21P4-201ENST00000487122 248 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC8.61□□□□□ -1.03
CLTCQ00610 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 AL021368.3-201ENST00000607119 578 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 AL049539.1-201ENST00000611964 459 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
CLTCQ00610 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.61□□□□□ -1.03
CLTCQ00610 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
CLTCQ00610 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 FBXL21-201ENST00000297158 1305 ntBASIC8.61□□□□□ -1.03
CLTCQ00610 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CLTCQ00610 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLTCQ00610 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC8.6□□□□□ -1.03
CLTCQ00610 FO393409.1-201ENST00000399325 1372 ntBASIC8.6□□□□□ -1.03
CLTCQ00610 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
CLTCQ00610 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
CLTCQ00610 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.6□□□□□ -1.03
CLTCQ00610 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CLTCQ00610 RNA5SP211-201ENST00000365516 117 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms