Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 AC022106.1-201ENST00000612834 766 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 RN7SL261P-201ENST00000613441 282 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 AC015819.1-201ENST00000613588 663 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 AC016583.1-201ENST00000624221 2431 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 AL359976.1-201ENST00000418655 3528 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 AL121768.1-201ENST00000613917 2544 ntBASIC5.37□□□□□ -1.55
HIST1H3AP68431 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.37□□□□□ -1.55
HIST1H3AP68431 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HIST1H3AP68431 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 RN7SKP108-201ENST00000411367 328 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 VN1R20P-201ENST00000425215 966 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC099782.1-201ENST00000425889 474 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AL390879.1-201ENST00000439143 386 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 OR7E22P-201ENST00000478335 1035 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 GUSBP9-201ENST00000510138 584 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 TPM3P3-201ENST00000521343 354 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC119403.2-201ENST00000590960 598 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 AL080312.2-201ENST00000613001 630 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC007603.3-201ENST00000636915 979 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 BX284613.1-201ENST00000452221 1641 ntBASIC5.36□□□□□ -1.55
HIST1H3AP68431 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HIST1H3AP68431 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HIST1H3AP68431 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HIST1H3AP68431 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 AC027575.3-201ENST00000583058 2747 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 AC024587.1-201ENST00000505925 2157 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 ZNF101P1-201ENST00000435701 1720 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HIST1H3AP68431 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HIST1H3AP68431 AC018717.1-201ENST00000457712 1505 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 MSL3P1-202ENST00000440028 1468 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 RNU105B-201ENST00000364478 208 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 RNU11-201ENST00000387069 134 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 AL034417.1-201ENST00000399343 800 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 SNORA77.2-201ENST00000408571 112 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.35□□□□□ -1.55
HIST1H3AP68431 RN7SKP146-201ENST00000410242 334 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 RN7SKP144-201ENST00000411108 279 ntBASIC5.35□□□□□ -1.55
HIST1H3AP68431 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms