Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RN7SL39P-201ENST00000462264 297 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.7□□□□□ -1.34
COPAP53621 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 AC018797.1-201ENST00000510791 255 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC117525.1-201ENST00000515228 503 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 RNU6-760P-201ENST00000516078 97 ntBASIC6.7□□□□□ -1.34
COPAP53621 SNORA74.1-201ENST00000516320 180 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC135983.3-201ENST00000528049 1226 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.7□□□□□ -1.34
COPAP53621 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 LINC00557-201ENST00000563184 1279 ntBASIC6.7□□□□□ -1.34
COPAP53621 RN7SL199P-201ENST00000578752 281 ntBASIC6.7□□□□□ -1.34
COPAP53621 RN7SL656P-201ENST00000579044 281 ntBASIC6.7□□□□□ -1.34
COPAP53621 RN7SL270P-201ENST00000579643 281 ntBASIC6.7□□□□□ -1.34
COPAP53621 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 AC134669.1-201ENST00000581275 672 ntBASIC6.7□□□□□ -1.34
COPAP53621 RN7SL404P-201ENST00000582421 281 ntBASIC6.7□□□□□ -1.34
COPAP53621 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.7□□□□□ -1.34
COPAP53621 AL499605.1-201ENST00000604628 403 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC016542.1-201ENST00000608259 493 ntBASIC6.7□□□□□ -1.34
COPAP53621 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.7□□□□□ -1.34
COPAP53621 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.7□□□□□ -1.34
COPAP53621 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 AC105749.1-201ENST00000631338 2008 ntBASIC6.7□□□□□ -1.34
COPAP53621 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.7□□□□□ -1.34
COPAP53621 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 PSMA6P1-201ENST00000400275 741 ntBASIC6.69□□□□□ -1.34
COPAP53621 RN7SKP296-201ENST00000411185 341 ntBASIC6.69□□□□□ -1.34
COPAP53621 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.69□□□□□ -1.34
COPAP53621 AL929472.1-201ENST00000417484 429 ntBASIC6.69□□□□□ -1.34
COPAP53621 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.69□□□□□ -1.34
COPAP53621 MTND4LP7-201ENST00000431728 294 ntBASIC6.69□□□□□ -1.34
COPAP53621 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 RPSAP40-201ENST00000442343 891 ntBASIC6.69□□□□□ -1.34
COPAP53621 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 H3F3AP5-201ENST00000475267 429 ntBASIC6.69□□□□□ -1.34
COPAP53621 AC112484.3-201ENST00000505910 329 ntBASIC6.69□□□□□ -1.34
COPAP53621 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 AC112206.4-201ENST00000515142 405 ntBASIC6.69□□□□□ -1.34
COPAP53621 OR7E10P-201ENST00000526420 991 ntBASIC6.69□□□□□ -1.34
COPAP53621 AC005363.1-201ENST00000530779 351 ntBASIC6.69□□□□□ -1.34
COPAP53621 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.69□□□□□ -1.34
COPAP53621 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.69□□□□□ -1.34
COPAP53621 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.69□□□□□ -1.34
COPAP53621 AP003115.1-201ENST00000569849 463 ntBASIC6.69□□□□□ -1.34
COPAP53621 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.69□□□□□ -1.34
COPAP53621 AL352984.2-201ENST00000611153 546 ntBASIC6.69□□□□□ -1.34
COPAP53621 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.69□□□□□ -1.34
COPAP53621 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 AL122023.1-201ENST00000622847 530 ntBASIC6.69□□□□□ -1.34
COPAP53621 AC073488.9-201ENST00000631601 754 ntBASIC6.69□□□□□ -1.34
COPAP53621 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 TMCC1P1-201ENST00000518897 1980 ntBASIC6.69□□□□□ -1.34
COPAP53621 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
COPAP53621 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COPAP53621 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.68□□□□□ -1.34
COPAP53621 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.68□□□□□ -1.34
COPAP53621 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COPAP53621 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
COPAP53621 RNA5SP65-201ENST00000363166 119 ntBASIC6.68□□□□□ -1.34
COPAP53621 RNA5SP279-201ENST00000365513 117 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms