Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GAPDHP37-201ENST00000442317 968 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 AC005165.2-201ENST00000466070 380 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC092824.1-201ENST00000483524 576 ntBASIC6.75□□□□□ -1.33
NEK3P51956 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 HMGB1P3-201ENST00000502802 616 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 IGHV3-57-201ENST00000520143 280 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.75□□□□□ -1.33
NEK3P51956 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.75□□□□□ -1.33
NEK3P51956 CR383656.14-201ENST00000551951 406 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 KATNBL1P5-201ENST00000605015 517 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC015849.2-201ENST00000605738 409 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC242628.1-201ENST00000606810 391 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC093635.1-201ENST00000609028 555 ntBASIC6.75□□□□□ -1.33
NEK3P51956 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AC005393.1-201ENST00000617916 584 ntBASIC6.75□□□□□ -1.33
NEK3P51956 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AP000577.1-201ENST00000624366 878 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AL161901.1-201ENST00000624954 3425 ntBASIC6.75□□□□□ -1.33
NEK3P51956 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 SPATA2P1-201ENST00000431223 2055 ntBASIC6.74□□□□□ -1.33
NEK3P51956 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.74□□□□□ -1.33
NEK3P51956 NENFP1-201ENST00000419476 466 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC073508.1-201ENST00000428866 656 ntBASIC6.74□□□□□ -1.33
NEK3P51956 XKRY2-201ENST00000442362 1093 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC245291.3-201ENST00000443400 292 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC092601.1-201ENST00000444526 383 ntBASIC6.74□□□□□ -1.33
NEK3P51956 UBBP5-201ENST00000446970 266 ntBASIC6.74□□□□□ -1.33
NEK3P51956 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.74□□□□□ -1.33
NEK3P51956 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.74□□□□□ -1.33
NEK3P51956 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 UGT2A3P7-201ENST00000510485 734 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC021269.1-201ENST00000526860 705 ntBASIC6.74□□□□□ -1.33
NEK3P51956 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.74□□□□□ -1.33
NEK3P51956 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.74□□□□□ -1.33
NEK3P51956 MTCO2P22-201ENST00000603246 681 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AL136370.1-201ENST00000608166 691 ntBASIC6.74□□□□□ -1.33
NEK3P51956 GAPDHP41-201ENST00000613707 975 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AL512506.1-201ENST00000613918 449 ntBASIC6.74□□□□□ -1.33
NEK3P51956 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 AC012254.5-201ENST00000623573 478 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC092159.4-201ENST00000624944 550 ntBASIC6.74□□□□□ -1.33
NEK3P51956 OR8A1-204ENST00000642111 1145 ntBASIC6.74□□□□□ -1.33
NEK3P51956 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 AC110792.3-201ENST00000595906 1614 ntBASIC6.74□□□□□ -1.33
NEK3P51956 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 AP001002.1-201ENST00000625148 1513 ntBASIC6.74□□□□□ -1.33
NEK3P51956 AC110373.1-201ENST00000505994 3505 ntBASIC6.74□□□□□ -1.33
NEK3P51956 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.74□□□□□ -1.33
NEK3P51956 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
NEK3P51956 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NEK3P51956 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.74□□□□□ -1.33
NEK3P51956 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NEK3P51956 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 TTC41P-205ENST00000551270 3963 ntBASIC6.73□□□□□ -1.33
NEK3P51956 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
NEK3P51956 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC009501.3-201ENST00000605001 1352 ntBASIC6.73□□□□□ -1.33
NEK3P51956 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.73□□□□□ -1.33
NEK3P51956 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NEK3P51956 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms