Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
HOXC13P31276 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 FUNDC2P3-201ENST00000334716 533 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 MIR130B-202ENST00000385018 82 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 CDY8P-201ENST00000428380 1279 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 CDY20P-201ENST00000447528 1279 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 NPM1P19-201ENST00000450070 712 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 VN1R38P-201ENST00000450265 887 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 RN7SL643P-201ENST00000471845 291 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 RPL12P30-201ENST00000488389 499 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 AC106800.3-201ENST00000511389 308 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 MTATP6P1-201ENST00000514057 681 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 IGHV4-55-201ENST00000520889 368 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 AC027544.3-201ENST00000535082 757 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC13P31276 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 AC002519.2-203ENST00000567043 837 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC13P31276 LINC00556-201ENST00000569603 412 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 AL445649.1-201ENST00000615941 691 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 MIR6811-201ENST00000620409 58 ntBASIC6.59□□□□□ -1.35
HOXC13P31276 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC13P31276 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC13P31276 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HOXC13P31276 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.59□□□□□ -1.36
HOXC13P31276 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC13P31276 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.59□□□□□ -1.36
HOXC13P31276 AC093225.1-201ENST00000506867 1408 ntBASIC6.59□□□□□ -1.36
HOXC13P31276 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
HOXC13P31276 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 AC010168.2-201ENST00000562691 5428 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXC13P31276 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 RNA5SP510-201ENST00000364697 99 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AL031985.1-201ENST00000392713 418 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC13P31276 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC13P31276 AC079355.1-201ENST00000421770 223 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AC094019.1-201ENST00000434678 472 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 AC110749.1-201ENST00000462007 357 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC13P31276 SCARNA21.2-201ENST00000516600 166 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 RNA5SP340-201ENST00000517132 107 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC13P31276 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 AL008723.3-201ENST00000608926 449 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 AL080312.2-201ENST00000613001 630 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 TCL6_3.1-201ENST00000619064 137 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 MTCO1P11-201ENST00000429111 1528 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
HOXC13P31276 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 AL161912.4-201ENST00000623889 2468 ntBASIC6.58□□□□□ -1.36
HOXC13P31276 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC13P31276 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HOXC13P31276 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC13P31276 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms