Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 IGHV1-14-201ENST00000523391 241 ntBASIC10.1□□□□□ -0.79
CFTRP13569 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC10.1□□□□□ -0.79
CFTRP13569 AC126177.5-201ENST00000549599 178 ntBASIC10.1□□□□□ -0.79
CFTRP13569 HSPE1P2-201ENST00000554777 306 ntBASIC10.1□□□□□ -0.79
CFTRP13569 AC004825.1-201ENST00000555068 586 ntBASIC10.1□□□□□ -0.79
CFTRP13569 GARSP1-201ENST00000570895 719 ntBASIC10.1□□□□□ -0.79
CFTRP13569 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
CFTRP13569 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CFTRP13569 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CFTRP13569 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
CFTRP13569 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CFTRP13569 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CFTRP13569 AP002370.1-201ENST00000528055 1602 ntBASIC10.09□□□□□ -0.79
CFTRP13569 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC10.09□□□□□ -0.79
CFTRP13569 AL157831.2-201ENST00000564681 3095 ntBASIC10.09□□□□□ -0.79
CFTRP13569 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC10.09□□□□□ -0.79
CFTRP13569 DNAJA1P6-201ENST00000437347 354 ntBASIC10.09□□□□□ -0.79
CFTRP13569 AC072052.1-201ENST00000496556 306 ntBASIC10.09□□□□□ -0.79
CFTRP13569 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CFTRP13569 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC10.09□□□□□ -0.79
CFTRP13569 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC10.09□□□□□ -0.79
CFTRP13569 AL121612.2-201ENST00000612261 482 ntBASIC10.09□□□□□ -0.79
CFTRP13569 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC10.09□□□□□ -0.79
CFTRP13569 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC10.09□□□□□ -0.79
CFTRP13569 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC10.08□□□□□ -0.8
CFTRP13569 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC10.08□□□□□ -0.8
CFTRP13569 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CFTRP13569 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
CFTRP13569 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 FABP12P1-201ENST00000401911 322 ntBASIC10.08□□□□□ -0.8
CFTRP13569 GAPDHP42-201ENST00000406848 981 ntBASIC10.08□□□□□ -0.8
CFTRP13569 AL022237.1-201ENST00000446663 358 ntBASIC10.08□□□□□ -0.8
CFTRP13569 RPL7P61-201ENST00000451721 751 ntBASIC10.08□□□□□ -0.8
CFTRP13569 AURKAPS1-201ENST00000451805 1212 ntBASIC10.08□□□□□ -0.8
CFTRP13569 AL645937.3-201ENST00000453647 936 ntBASIC10.08□□□□□ -0.8
CFTRP13569 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC10.08□□□□□ -0.8
CFTRP13569 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC10.08□□□□□ -0.8
CFTRP13569 AC139365.2-201ENST00000517972 253 ntBASIC10.08□□□□□ -0.8
CFTRP13569 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC10.08□□□□□ -0.8
CFTRP13569 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC10.08□□□□□ -0.8
CFTRP13569 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC10.08□□□□□ -0.8
CFTRP13569 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC10.08□□□□□ -0.8
CFTRP13569 MIR6820-201ENST00000611508 62 ntBASIC10.08□□□□□ -0.8
CFTRP13569 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
CFTRP13569 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 AP002364.1-201ENST00000623330 3386 ntBASIC10.08□□□□□ -0.8
CFTRP13569 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CFTRP13569 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC10.08□□□□□ -0.8
CFTRP13569 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
CFTRP13569 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 MIR765-201ENST00000390226 114 ntBASIC10.07□□□□□ -0.8
CFTRP13569 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC10.07□□□□□ -0.8
CFTRP13569 LDHBP2-201ENST00000456969 1005 ntBASIC10.07□□□□□ -0.8
CFTRP13569 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 RPL15P21-201ENST00000495592 567 ntBASIC10.07□□□□□ -0.8
CFTRP13569 RBM22P12-201ENST00000567098 1255 ntBASIC10.07□□□□□ -0.8
CFTRP13569 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.07□□□□□ -0.8
CFTRP13569 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
CFTRP13569 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.07□□□□□ -0.8
CFTRP13569 EEF1A1P30-201ENST00000429708 1315 ntBASIC10.06□□□□□ -0.8
CFTRP13569 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC10.06□□□□□ -0.8
CFTRP13569 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC10.06□□□□□ -0.8
CFTRP13569 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 AC110597.1-201ENST00000562669 3176 ntBASIC10.06□□□□□ -0.8
CFTRP13569 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.06□□□□□ -0.8
CFTRP13569 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 RPL37P18-201ENST00000411602 243 ntBASIC10.06□□□□□ -0.8
CFTRP13569 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC10.06□□□□□ -0.8
CFTRP13569 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC10.06□□□□□ -0.8
CFTRP13569 AP000676.2-201ENST00000529711 301 ntBASIC10.06□□□□□ -0.8
CFTRP13569 HIGD1AP5-201ENST00000529959 259 ntBASIC10.06□□□□□ -0.8
CFTRP13569 MIR4260-201ENST00000583107 67 ntBASIC10.06□□□□□ -0.8
CFTRP13569 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC10.06□□□□□ -0.8
CFTRP13569 AC090510.2-201ENST00000617465 629 ntBASIC10.06□□□□□ -0.8
CFTRP13569 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
CFTRP13569 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
CFTRP13569 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC10.06□□□□□ -0.8
CFTRP13569 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC10.06□□□□□ -0.8
CFTRP13569 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
CFTRP13569 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC10.06□□□□□ -0.8
CFTRP13569 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
CFTRP13569 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms