Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 AC022146.1-201ENST00000595307 847 ntBASIC2.56□□□□□ -2
USH2AO75445 AC092653.1-201ENST00000608509 531 ntBASIC2.56□□□□□ -2
USH2AO75445 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC013268.3-201ENST00000262716 2324 ntBASIC2.56□□□□□ -2
USH2AO75445 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC2.56□□□□□ -2
USH2AO75445 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC008937.3-201ENST00000606813 1700 ntBASIC2.56□□□□□ -2
USH2AO75445 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC2.56□□□□□ -2
USH2AO75445 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC2.56□□□□□ -2
USH2AO75445 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 AP001781.1-201ENST00000530977 207 ntBASIC2.56□□□□□ -2
USH2AO75445 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 LAPTM4BP2-201ENST00000604542 446 ntBASIC2.56□□□□□ -2
USH2AO75445 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 MYH13-201ENST00000252172 5992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 MRRF-207ENST00000373729 870 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 AC091390.3-201ENST00000426478 338 ntBASIC2.56□□□□□ -2
USH2AO75445 AC008072.1-201ENST00000434254 824 ntBASIC2.56□□□□□ -2
USH2AO75445 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 DEFA11P-201ENST00000446470 261 ntBASIC2.56□□□□□ -2
USH2AO75445 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC2.56□□□□□ -2
USH2AO75445 AC073358.1-201ENST00000505671 684 ntBASIC2.56□□□□□ -2
USH2AO75445 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC2.56□□□□□ -2
USH2AO75445 PCNPP1-201ENST00000552501 511 ntBASIC2.56□□□□□ -2
USH2AO75445 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC009163.6-201ENST00000612367 342 ntBASIC2.56□□□□□ -2
USH2AO75445 WWOX-217ENST00000620008 450 ntTSL 2 BASIC2.56□□□□□ -2
USH2AO75445 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
USH2AO75445 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC2.56□□□□□ -2
USH2AO75445 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC2.56□□□□□ -2
USH2AO75445 FTH1P8-201ENST00000498161 514 ntBASIC2.56□□□□□ -2
USH2AO75445 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 SAP18P1-201ENST00000512058 390 ntBASIC2.56□□□□□ -2
USH2AO75445 RNA5SP373-201ENST00000517271 95 ntBASIC2.56□□□□□ -2
USH2AO75445 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC2.56□□□□□ -2
USH2AO75445 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
USH2AO75445 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USH2AO75445 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms