Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC10.39□□□□□ -0.75
CUX2O14529 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CUX2O14529 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC10.39□□□□□ -0.75
CUX2O14529 RNA5SP305-201ENST00000362665 119 ntBASIC10.39□□□□□ -0.75
CUX2O14529 COX6CP17-201ENST00000421389 185 ntBASIC10.39□□□□□ -0.75
CUX2O14529 AC126120.1-201ENST00000431082 470 ntBASIC10.39□□□□□ -0.75
CUX2O14529 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 OR52B5P-201ENST00000435337 951 ntBASIC10.39□□□□□ -0.75
CUX2O14529 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 AL049779.2-201ENST00000553847 315 ntBASIC10.39□□□□□ -0.75
CUX2O14529 ATP5J2P6-201ENST00000565203 266 ntBASIC10.39□□□□□ -0.75
CUX2O14529 AC234771.5-201ENST00000600161 514 ntBASIC10.39□□□□□ -0.75
CUX2O14529 OR52B5P-202ENST00000641118 1110 ntBASIC10.39□□□□□ -0.75
CUX2O14529 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
CUX2O14529 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CUX2O14529 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC10.39□□□□□ -0.75
CUX2O14529 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CUX2O14529 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CUX2O14529 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC10.38□□□□□ -0.75
CUX2O14529 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
CUX2O14529 MRRF-207ENST00000373729 870 ntTSL 3 BASIC10.38□□□□□ -0.75
CUX2O14529 RN7SKP27-201ENST00000410684 333 ntBASIC10.38□□□□□ -0.75
CUX2O14529 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC10.38□□□□□ -0.75
CUX2O14529 AL049745.1-201ENST00000433953 286 ntBASIC10.38□□□□□ -0.75
CUX2O14529 RANP1-206ENST00000455094 651 ntBASIC10.38□□□□□ -0.75
CUX2O14529 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC10.38□□□□□ -0.75
CUX2O14529 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC10.38□□□□□ -0.75
CUX2O14529 AC073869.10-201ENST00000642016 354 ntBASIC10.38□□□□□ -0.75
CUX2O14529 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
CUX2O14529 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC10.38□□□□□ -0.75
CUX2O14529 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CUX2O14529 AC010624.4-201ENST00000597606 1351 ntBASIC10.38□□□□□ -0.75
CUX2O14529 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC10.38□□□□□ -0.75
CUX2O14529 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
CUX2O14529 AC005839.1-201ENST00000624148 3213 ntBASIC10.38□□□□□ -0.75
CUX2O14529 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
CUX2O14529 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC10.38□□□□□ -0.75
CUX2O14529 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 U3.2-201ENST00000362981 210 ntBASIC10.37□□□□□ -0.75
CUX2O14529 AL663074.2-201ENST00000440621 479 ntBASIC10.37□□□□□ -0.75
CUX2O14529 BX284632.1-201ENST00000478218 541 ntBASIC10.37□□□□□ -0.75
CUX2O14529 AC110775.1-201ENST00000513721 462 ntBASIC10.37□□□□□ -0.75
CUX2O14529 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
CUX2O14529 AL110118.1-201ENST00000553543 400 ntBASIC10.37□□□□□ -0.75
CUX2O14529 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC10.37□□□□□ -0.75
CUX2O14529 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC10.37□□□□□ -0.75
CUX2O14529 AL359704.2-201ENST00000604335 521 ntBASIC10.37□□□□□ -0.75
CUX2O14529 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
CUX2O14529 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
CUX2O14529 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC10.37□□□□□ -0.75
CUX2O14529 AC020978.8-201ENST00000571975 3022 ntBASIC10.37□□□□□ -0.75
CUX2O14529 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC10.37□□□□□ -0.75
CUX2O14529 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
CUX2O14529 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
CUX2O14529 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC10.36□□□□□ -0.75
CUX2O14529 AL139156.3-201ENST00000454802 394 ntBASIC10.36□□□□□ -0.75
CUX2O14529 NDUFA5P9-201ENST00000472609 340 ntBASIC10.36□□□□□ -0.75
CUX2O14529 RN7SL57P-201ENST00000493687 290 ntBASIC10.36□□□□□ -0.75
CUX2O14529 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC10.36□□□□□ -0.75
CUX2O14529 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC10.36□□□□□ -0.75
CUX2O14529 AL023583.1-201ENST00000607518 1143 ntBASIC10.36□□□□□ -0.75
CUX2O14529 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC10.36□□□□□ -0.75
CUX2O14529 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
CUX2O14529 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
CUX2O14529 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 AC119674.1-202ENST00000641333 1860 ntBASIC10.36□□□□□ -0.75
CUX2O14529 ALB-209ENST00000503124 1741 ntTSL 5 BASIC10.36□□□□□ -0.75
CUX2O14529 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
CUX2O14529 AC020898.1-201ENST00000474167 787 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms