Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 AC114546.4-201ENST00000624413 369 ntBASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 AC010608.2-201ENST00000624830 470 ntBASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TMEM88BA6NKF7 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 NLRP9P1-201ENST00000540920 2655 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC111188.2-201ENST00000529697 1387 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 RN7SKP81-201ENST00000365603 331 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 SETP15-201ENST00000412724 337 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 OR4K6P-201ENST00000416478 897 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 RPL7P53-201ENST00000421245 739 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CHEK2P5-201ENST00000423877 246 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 C1DP1-201ENST00000426049 402 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 LSM3P3-201ENST00000436601 306 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 SNORA81.1-201ENST00000458922 177 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC084754.1-201ENST00000463466 464 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC006539.1-201ENST00000481419 501 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 RPS4XP14-201ENST00000493072 781 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 NBEAP1-201ENST00000554452 979 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 OR11H3P-201ENST00000554547 982 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC095057.3-201ENST00000567102 1157 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 ATP5F1P7-201ENST00000567330 760 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 DPRXP4-201ENST00000578053 568 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AP001542.2-201ENST00000593141 364 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AL157770.1-201ENST00000623049 439 ntBASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TMEM88BA6NKF7 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
TMEM88BA6NKF7 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
TMEM88BA6NKF7 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
TMEM88BA6NKF7 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
TMEM88BA6NKF7 RNA5SP198-201ENST00000410376 127 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms