Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DNMT3AQ9Y6K1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 KRT16P5-201ENST00000455284 522 ntBASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 AP006294.2-201ENST00000641667 209 ntBASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DNMT3AQ9Y6K1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 AL691432.2-201ENST00000607222 2038 ntBASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 YBX1P10-201ENST00000444752 975 ntBASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3AQ9Y6K1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3AQ9Y6K1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3AQ9Y6K1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms