Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 AL023973.1-201ENST00000624619 620 ntBASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 AL031432.5-201ENST00000641059 760 ntBASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 KRT18P38-201ENST00000449496 1282 ntBASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PTCH2Q9Y6C5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
PTCH2Q9Y6C5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PTCH2Q9Y6C5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PTCH2Q9Y6C5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PTCH2Q9Y6C5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PTCH2Q9Y6C5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 AC004951.3-201ENST00000418645 1148 ntBASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 AP000347.1-202ENST00000435868 847 ntBASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 VENTXP5-201ENST00000523979 775 ntBASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PTCH2Q9Y6C5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 PVRIG2P-201ENST00000435460 978 ntBASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 AC140113.3-201ENST00000605663 199 ntBASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PTCH2Q9Y6C5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 TSPY21P-201ENST00000433481 731 ntBASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 TSPY23P-201ENST00000440136 739 ntBASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 KRT18P16-201ENST00000510337 1294 ntBASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 PRSS44-201ENST00000515154 1146 ntBASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PTCH2Q9Y6C5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PTCH2Q9Y6C5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms