Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC2Q9Y5Z7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCFC2Q9Y5Z7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.74■□□□□ 0.91
HCFC2Q9Y5Z7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 RCC2P6-201ENST00000526625 1557 ntBASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 HMGA1P5-201ENST00000412453 271 ntBASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 AC011298.2-201ENST00000617989 482 ntBASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HCFC2Q9Y5Z7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 UPK3BP1-201ENST00000428678 509 ntBASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HCFC2Q9Y5Z7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 AC008040.2-201ENST00000461049 708 ntBASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 AC091076.1-201ENST00000610741 619 ntBASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HCFC2Q9Y5Z7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
HCFC2Q9Y5Z7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 AC091390.4-202ENST00000476426 537 ntBASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 AC139887.4-201ENST00000607877 719 ntBASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 AL138966.2-201ENST00000621997 464 ntBASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 HLA-A-209ENST00000638375 975 ntBASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 MYC-208ENST00000641036 567 ntBASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.7■□□□□ 0.9
HCFC2Q9Y5Z7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.69■□□□□ 0.9
HCFC2Q9Y5Z7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.69■□□□□ 0.9
HCFC2Q9Y5Z7 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.69■□□□□ 0.9
HCFC2Q9Y5Z7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC2Q9Y5Z7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HCFC2Q9Y5Z7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms