Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 POM121L13P-201ENST00000422362 380 ntBASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 AL356652.1-201ENST00000615962 565 ntBASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB6Q9Y5F9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 BX323043.1-201ENST00000641006 1765 ntBASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 RPS2P4-201ENST00000476944 856 ntBASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB6Q9Y5F9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 RPPH1-201ENST00000516869 333 ntBASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 AC069544.1-201ENST00000609399 999 ntBASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB6Q9Y5F9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB6Q9Y5F9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms