Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 TFP1-202ENST00000475455 1573 ntBASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHGC4Q9Y5F7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
PCDHGC4Q9Y5F7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 C1QBPP2-201ENST00000528754 825 ntBASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHGC4Q9Y5F7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 AC098590.1-201ENST00000468126 897 ntBASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 PRKY-204ENST00000533551 1019 ntBASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHGC4Q9Y5F7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 AP001271.2-201ENST00000624018 1556 ntBASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHGC4Q9Y5F7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDHGC4Q9Y5F7 RPPH1-201ENST00000516869 333 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms