Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 AL049637.2-201ENST00000641778 930 ntBASIC20.08■□□□□ 0.81
PCDHB9Q9Y5E1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB9Q9Y5E1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB9Q9Y5E1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB9Q9Y5E1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB9Q9Y5E1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB9Q9Y5E1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 AC239809.2-201ENST00000415381 517 ntBASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 AL023875.1-201ENST00000640777 796 ntBASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB9Q9Y5E1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 AC112907.3-201ENST00000577781 2400 ntBASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PCDHB9Q9Y5E1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB9Q9Y5E1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms