Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 AC008687.6-201ENST00000596318 630 ntBASIC19.84■□□□□ 0.77
PKP3Q9Y446 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PKP3Q9Y446 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PKP3Q9Y446 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 CD99P1-205ENST00000527459 561 ntBASIC19.83■□□□□ 0.77
PKP3Q9Y446 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PKP3Q9Y446 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.83■□□□□ 0.77
PKP3Q9Y446 AC120498.8-201ENST00000614275 531 ntBASIC19.83■□□□□ 0.77
PKP3Q9Y446 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP3Q9Y446 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP3Q9Y446 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP3Q9Y446 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP3Q9Y446 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.83■□□□□ 0.76
PKP3Q9Y446 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP3Q9Y446 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PKP3Q9Y446 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 AP003097.1-201ENST00000530657 1135 ntBASIC19.82■□□□□ 0.76
PKP3Q9Y446 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 TMEM179-206ENST00000616017 1645 ntBASIC19.82■□□□□ 0.76
PKP3Q9Y446 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKP3Q9Y446 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.82■□□□□ 0.76
PKP3Q9Y446 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.81■□□□□ 0.76
PKP3Q9Y446 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PKP3Q9Y446 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
PKP3Q9Y446 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 AL121906.2-201ENST00000621597 723 ntBASIC19.8■□□□□ 0.76
PKP3Q9Y446 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PKP3Q9Y446 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PKP3Q9Y446 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PKP3Q9Y446 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms